Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | NVMARAWEIAKAAVLKFGGKAKEYFAQALVMAWAEIKTTKAIVEWDLPADTRKCRTWMARITGTHPVYKLDRQFVNPDGEDKYGDKLFDLTNGYYEAYNGKRRYFIQVIKGKA |
1 | 2ftbA | 0.05 | 0.04 | 0.65 | 0.67 | DisCoVER | | ------------------------------------FNGTWQVYSQYFLRAVGLKDINPIIEIQQNDNFVVTSKTEAEITSMGGKIKCTVNEMVETLTVGGATLIRRSKR--- |
2 | 5jnqA | 0.03 | 0.03 | 0.82 | 0.83 | DEthreader | | LAIIIAFAISALLCPIIILMGGLIILSSIIITSVFYIPSYPKIVFVTFLVGQFIITFAYL----------SGEVGTDMSFVPFFIM--LVASITVV----DSLAGFASM---- |
3 | 4pu6A | 0.09 | 0.08 | 0.92 | 0.56 | CEthreader | | QLLTRCLNLGISALNS-NVPAIDVVELVVRELETDPLKGTVEMEASIMDGPKRRCGAVSGLTTV-----KNPISLARLVMDKSPHSYIAFSGAEDFA---RQQGVEVVDNEYF |
4 | 3ffkA | 0.04 | 0.04 | 0.93 | 0.62 | EigenThreader | | NLQYDL--HY--WLGNECSESGAAAIFTVQLDDYLFLGYQRLFQVKGRRVVSFNNGDCFILDLGN----NIHQWCGDTAKEDAANRYKVSNEDCFIDHGKDGKIFVWKGKQAN |
5 | 1xq8A | 0.26 | 0.09 | 0.35 | 0.33 | HHpred | | DVFMKGLSKAKEGVVAAAEKTK----QGVAEAAGKTKEGVLYV---------------------------------------------------------------------- |
6 | 1olpA | 0.12 | 0.12 | 0.96 | 0.57 | MRFsearch | | --MSNSWDDWEYAASHGVGNAQKGVAGYLYRFLNDVSNNEIVVMIKTADVQDADNYIYFGIETK---DGVKEEWALDNDFTRNQEGTYTLKKNMWIRDEWKPSYVKVIAGDKV |
7 | 6lkgB | 0.12 | 0.11 | 0.88 | 0.39 | FFAS-3D | | ---KQIQTFSTQHNNSFQETNHHDVTATKRELLKLIHQQPATLYYELSGPNQ-------FITNNYEHLNTKNMYLFSTHQLKFKNSTYMLK--IYMANTPRNRQFALIVDQ-- |
8 | 1tlgA | 0.07 | 0.07 | 0.99 | 0.72 | SPARKS-K | | SDETMNYADAGTYCQSRGMAVSSAMRTMVKAILAFTEVKGHDYWVGADNLQDGAYNFLWNDGVSLPTSDLWSPNEPSNPQSWQLCVQIWSKYNLLDDVGGGARRVICEKELD- |
9 | 4rm8A | 0.12 | 0.11 | 0.87 | 0.49 | CNFpred | | --RDQWEDRIQVWHAEHGMLKDNAMLEYLKIAQDLEMYGINYFEIKNK---KGTDLWLGVDA-------LGLNIYEKDDKL--PKIGFPWS-EIRNISFNDKKFVIKPIDKKA |
10 | 5nfiB | 0.09 | 0.08 | 0.93 | 1.00 | DEthreader | | VARLNV--YAFILRS--EKDG-LY--TIFAWYAT-LREYTNRVTVSVDSLPHPYEIKLASNGSYRTVAKADSTYYPGETKVVDTCRAFFTTKLNTLSVTHEIFRTLVILRIND |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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