>PF07407 (420 residues) MMIALIQMKNMKCTLKVEETTENQELEGVSFDELVALREENAKLKQENEALKAKLHRLES DWTTSDIVEKVELMDAQFDRIGKIMDKMREPMLFKRDEIELHGDLLARVEGLLRIKNERS EIEFEKDIQCIVGRCFSDENKQRNLEKMIKSFEYDDIADTIALRLTHFIQDPGLRSIVYA MCKAAVLNQNYLNIEVQEIVDVTRQKYTHNARDDIDFYPMFTFDANVPEGVFDHIYKKHY LSPQSAALVHTLSHLDVNVDGNGIAMYHIGSATRFAECSVVYVDGRAYKPIRVMAEYAIF PTLPHEYKGRVEGLLLLHGGLAPITLVRVYHDVNVGGLVTGSIAASVSTLLRNCMLYSFD IYFTPNGVCINAVGNNNFVNIIDINCCGRAFGKAPLDQGSWNRNKFMGHKHGRGSKCKQY |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | MMIALIQMKNMKCTLKVEETTENQELEGVSFDELVALREENAKLKQENEALKAKLHRLESDWTTSDIVEKVELMDAQFDRIGKIMDKMREPMLFKRDEIELHGDLLARVEGLLRIKNERSEIEFEKDIQCIVGRCFSDENKQRNLEKMIKSFEYDDIADTIALRLTHFIQDPGLRSIVYAMCKAAVLNQNYLNIEVQEIVDVTRQKYTHNARDDIDFYPMFTFDANVPEGVFDHIYKKHYLSPQSAALVHTLSHLDVNVDGNGIAMYHIGSATRFAECSVVYVDGRAYKPIRVMAEYAIFPTLPHEYKGRVEGLLLLHGGLAPITLVRVYHDVNVGGLVTGSIAASVSTLLRNCMLYSFDIYFTPNGVCINAVGNNNFVNIIDINCCGRAFGKAPLDQGSWNRNKFMGHKHGRGSKCKQY | |||||||||||||||||||
1 | 6oisC | 0.06 | 0.04 | 0.57 | 0.62 | DisCoVER | KSQKMDIILHENSAAGVLSLLMLTKGVVGV---V--AK-----------LG---K--------------VNDENLSQILSNYLGTRSMLAVVCRNYESVTA-----------------------------------------------------------LE--AY--DNHGNIDINAGLHCLGSSI-----REIGD---------------SFDAICLENLRPY------VGQHIADDLQ--------RRLDLLKPKLCP-PGFLGFAVNMIQIDPAYLLCVTS-YGYGLRETLFYNL-----------------------FSRLQVYKTRDMISALPCI-SD--GA-VS---LDGGIIR-------KT-FNL-----NRDEVNVR--FAKPAEKKMKELKWKKEKTLEDIKREQ---- | |||||||||||||
2 | 6rc9A | 0.05 | 0.03 | 0.66 | 0.67 | DEthreader | IQTTYDPTRT----------VEVLLVPRSVVYYEQLQ-RGL-GLP-QESGGAMFGLKVKNAERSEESQSVQLKADDFGTSPTPWRPWLAT--LDPKAMTANYPPSWRTP--KW-N-----------HH-----------------GLWDWKARDLQTTFNPRRHPEWFDG---GQTVADNEKTFDVDNSNQGFQKEADSDKSAP-IA--LP---YFANLSIYFMQTDGVVLAGTI----------------EDLQLFTPWNRMQVSNAYQPNSLFTGGLDFPTADWTKNNAAQ--LR----------AYGEVNGLLNPALVETY-------------------------------------IGFKSKATLIT--STTTATRNAL-AFQ--KVTQS-----KLDDDLK------------- | |||||||||||||
3 | 1vt4I | 0.07 | 0.07 | 1.00 | 0.69 | CEthreader | YSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 5ot4A | 0.07 | 0.06 | 0.87 | 0.70 | EigenThreader | QEFWDEHDPSLMEQYLKSDDFLNSTDPTYNFQKLHQFAAEQRVKLGLEDTLVAILKN----NPEECRAYIESKIKRIKEQARDLLLLKLINSS---------GEQEAAKRGFDSYVQSLSHNALLAKGLEGFKNSLD-EPYKTYLERAQGVLGARYLQAVLSSDALN---AKDANALITELKIDKAVTEENLGSLKKNMMKSFINNIKDETNLKALDALKALDGAKNLDKFKEVLGKLGITPAWARARQFELEINRVSSLGSGA----HSKLMSTLTKL-----PGKNASGIAELLTENKRLEGFRAIHNAEVARVLANF--------------KPEITLNDKQVAAINQALTTANSN--------------PNTYTQATDYKILIDAIKTQSGSVNQKDFYNAFNLNDDGRAFTSSTPR | |||||||||||||
5 | 4y66D | 0.14 | 0.05 | 0.37 | 0.53 | HHpred | ----LDELVAQNLLWNQNLLELSDAQLMEVNAQINDLKAQVEKLTQQGETLRITQRNLEAAPITEVLKQEVDELRQQVSANDEKLRLVRES------NAIVSDADMLTLQKNYKAMTAWARAKCREVIDTLSEGMGV---K------------PSAFMDQLGL-----EEGLPMTTY-TEMKKAL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 6ianC | 0.08 | 0.04 | 0.45 | 0.47 | MRFsearch | --RGFVNTHRRVDALRT------------AHADPADARRAVTVLEEECDRLRGYIQVAEKKLDKEALLNACKSLRAALEEESRLAEKGVELQQQ----LISSRQRSTEHNRLQNLRRDAADGRVDVIVRRLRDEIQTNKIIEEQLPKELQQ------KQRENAEFDRLISEPLDQALTTENQQL--------DEALKKLHQQVKERQKP------------------------------GEDGSTIATIKQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 5f4yA | 0.18 | 0.07 | 0.38 | 0.78 | FFAS-3D | ----------------------KQELIESISRKLQVLREARESLLEDNTVLGAEVEAIVKGVCKPSEFDKFRMFIGDLDKVVNLLLSLS--------------GRLARVENALNNLDDGASPGDRQSLLEKQRVLIQQHEDAKELKENL-----DRRERIVFDILANYLSEESLADYEHFVKMKSAL-----IIEQRELEDKIHL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
8 | 3vuoA | 0.10 | 0.10 | 0.98 | 0.67 | SPARKS-K | QNSGPISLISKKSEPNIEIDDIPDSLLGLSF---KDLNNKLYEIYSKNRVYFRKIYFNFLDQYYSQYFELICMAKQSILAQESVVKQIIQNKFTDLSKASIPPDTLKLIKETTEKTFIDLSNESQISMNRVDNFLNSICVFVEDIYPKFISYMEKYINNINIKTREFIQRCTNINDNEKSILINSFKTIDFKFLNIQAIKNFFNSQVEQVMKEMLSPYQLLLFATRGPNS--NIIEDISLIQTESVELVYGVNGESLYLKSPNETVEFSNNFNNFTICFWLRFDDDKTRLIGNKVVFEIIDSNGNQESVYLSNVI--NNNWYYISISVDRLKDQLLIFINDKANVSIEQILNIYSTNVISLVNKNNSIYVEEVLDKPVASEEVIRNYFSYLDNSSKSLLEYNKNYQLYNYVFPETSLYEV | |||||||||||||
9 | 1sumB | 0.06 | 0.03 | 0.48 | 0.69 | CNFpred | -----------------------------LNEKVEEFKKGVLKAGWIEKMFRNSISSLVERNLAREVIADEEVVDQMEVEIQEKAMEVLGLFSPIGKPLLTVTAGIRVAELIENIADK--CHDIAKNVLELMEE--PPLKPLEDIPAMANQ--TSEMLKFALRMFADVN-VEKSFEVCRMDSKVDDLYEK----VREELLLYMMESP-------KYVKRALLL--------LEIAGNIEIIADYATNIVEVSVYMV-------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 4knhA | 0.04 | 0.03 | 0.75 | 0.67 | DEthreader | -----------ADEDQFGADKIFGIPVKKFIPRCMEAMKGVRSMLQCMADKANARNMLQQASLVRPLDNQETLDFSRLSLVEQHECLASILHAAVQRH-------LIPVLAAYITEF------G---SP---------------EGMGDLQQARRLN-----------------------LPVLGAAVRALEGA-DFILSVAADCKAQE-WQDPSQLGRQWLQ-LLRTEDEQRQ-RPNHEQDMDLERFLIIISYAYEGCLADARLIAKLAT----------SEI-ARKRLIMDE-NLVDTICI--VL-ALMIRK-THEELDAMWVEFFGTGFEQS---N-AFIQLLTL--GIEPYVDFVFLRLS--DFVMVCLHPFSRVME--WLFN------E--KVITSLAVMKALELQETYLLVRPS | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |