>PF07387 (307 residues) VQKNCFQVYKSQNVYRVRFCVEGKIHDVPLPGVNTHRDIIGTVKYFCELMGLNIVDNSLR LNWLNLSDMKNHGDNVTLAKVGSEYGDLFVKKLPTLPINIHSTNYVFGKYSVFARVHGIV KLLNDDNYDVGVILEKCNEIRVMTVNIIVMGLKSLMDSHRESGGTLHGDCTVQNLMCDKF GMLKLVDPGNLMSQTVIWKNDTQYFGNTVDDEVCSFVMACLKTTANLRNIETSELTIPFI TDLYLLDTVLSDPNVIHGTRESGWLEVGSDFVSIVQMFVALANMVRPYNLDDVVSALKTQ VTGENET |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | VQKNCFQVYKSQNVYRVRFCVEGKIHDVPLPGVNTHRDIIGTVKYFCELMGLNIVDNSLRLNWLNLSDMKNHGDNVTLAKVGSEYGDLFVKKLPTLPINIHSTNYVFGKYSVFARVHGIVKLLNDDNYDVGVILEKCNEIRVMTVNIIVMGLKSLMDSHRESGGTLHGDCTVQNLMCDKFGMLKLVDPGNLMSQTVIWKNDTQYFGNTVDDEVCSFVMACLKTTANLRNIETSELTIPFITDLYLLDTVLSDPNVIHGTRESGWLEVGSDFVSIVQMFVALANMVRPYNLDDVVSALKTQVTGENET | |||||||||||||||||||
1 | 6j5tH | 0.12 | 0.10 | 0.83 | 1.17 | DEthreader | AWF------------------------------------FSPEQ---------ILKATNNFDSSCFVSQ--D-VYYKWYRGEIED-RSYMIKRFSEITKRHRVKEVYNDIVLSARMSHFLQLLGCCLVFEAGAMNGGLLPWSVRLKIGKEIANAVTYLHTFPKIIIHRDVKPMHVFLDKNWTAKLSDLSFSVLGTFGYIDPLYHCFVTEYTDVYSFGICLLVIITGKPAIMTDGDLQGILSVRELCNGKLDEVIDPRLMKDITSQRLQVEACVVLALRCCKERDEDRPKMIQVAKELKQIEAS-L-- | |||||||||||||
2 | 4oliA | 0.11 | 0.07 | 0.69 | 0.83 | DEthreader | DPSHHAAFT---LA--VCVRGPENIMVTHNVCGNILLARLPFI---HKRYLKKISLYCY-DPTN------------------DG-----------------------------------------M-YVPLGSLDYLHIGLAQLLLFAQQICEGMAYLHSQ-H-YIHRNLAARNVLLDN-D-VKIGDFGLEGDSPVFWYAPECLYKFYYASDVWSFGVTLYELLTDQSPPKFLTELLERGER--LP--RP-----D--------KCP--CEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ-- | |||||||||||||
3 | 4l68A | 0.12 | 0.10 | 0.84 | 3.80 | HHpred | ---------------------------------------TQVSLFQKPLVKVKLGDLMAATNNFNSENIIVSTRTGTTYKALLPDGSALAVKHLSTCKLGE--REFRYEMNQLWELRNLAPLLGFEKFLVNGTLHSLLLDWSTRFRIGLGAARGLAWLHHGRPPILHQNICSSVILIDEDFDARIIDSGLPDLGEFGYVAP-EYSLASLKGDVYGLGVVLLELATGLKAVGGVDWVKQLESSGRIAET--FDENIR-GKGH----DEEISKFVEIALNCVSSPKERW-SMFQAYQSLKAIAEKQGYS | |||||||||||||
4 | 4dn5A | 0.11 | 0.10 | 0.88 | 0.52 | DisCoVER | VLQGSVSSGQA-----HSLTSL--AKTWARGSEDNEGVLLTEKLKPVDY----EYREEV-H-WATHQLRLGRGSFGEVHRMEDKQTFQCAVKKVRLEV----F--RAEELMACAGSPRIVPLYGAVRVIFMELLGSLCLPEDRALYYLGQALEGLEYLH--SRRILHGDVKADNVLLSSDGHAALCDFGHAIPGTETHMAPEVVLSCDAKVDVWSSCCMMLHMLNGCHPWTQFFLCLKIASEP-P--PVR-E--I----PP-SCAPLTAQAIQ-EG--LRKEPIHRV-SAAELGGKVNRALQQVGL- | |||||||||||||
5 | 5wniA | 0.12 | 0.09 | 0.74 | 0.40 | MRFsearch | --------------------------------------------------------------------AGWEKVGSQVYKVRHVHKTWLAIKCSPSLHDDRERMELLEEAKKMEMAKYILPVYGICQEPVGLVMEYMELPWDLRFRIVHETAVGMNFLHCMSPPLLHLNLKPANILLDAHYHVKISDFGLAKFGTIAYLPPERIREFDTKHDVYSFAIVIWGVLTQKKPFADE------KNILHIMMKVVKGHRPELPPICRPRPRACASLIGLMQRCWHADPQVRP-TFQEITSETEDLCE----- | |||||||||||||
6 | 2qkwB | 0.14 | 0.12 | 0.81 | 1.44 | SPARKS-K | ----------------------------------------------------PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPE-SSQGIEEFETEIETLSFCPHLVSLIERNEMILNGNLKRHSMSWEQRLEICIGAARGLHYLHTR--AIIHRDVKSINILLDENFVPKITDFGISVKGTLGYIDP-EYFILTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNQLEQIVDPNLADKIRPESLRKFGDTAVKCLASSEDRP-SMGDVLWKLEYALRLQESV | |||||||||||||
7 | 3bkbA | 0.11 | 0.10 | 0.94 | 0.47 | MAPalign | HSGDFLVRESGKQEYVLSVLWDGLPRHFIIQSLDNLYRLEGEGFHLLSTQQPLTKKSGVVLEDLVLGEQIGRGNFGEVFSGRLRANTLVAVKSCRETLPPDLKAKFLQEARILKQYPNIVRLIGIYIVMEGGDFLTFLLRVKTLLQMVGDAAAGMEYLESK--CCIHRDLAARNCLVTEKNVLKISDSRGLRQVPVKWTAPEALGRYSSESDVWSFGILLWETFSLGASPY------PNLSNQQTREFVE-------KGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRH--- | |||||||||||||
8 | 5uv4A | 0.12 | 0.10 | 0.81 | 0.26 | CEthreader | ----------------------------------------------DLHLFDNSVVFTAEELSCAPAEIIGRSCHGTSYKATLDNGYMLTVKWLKEGFAKS-KKEFSREIKKLGSVRNLVPLRGYYWGADATSLSTYLLSAGQRLNIAIDIARCLDYLHNE-RVIPHGNIKSSNVLIQSTPSALVTDYSLHRAGALGYSPPEFSPCPSLKSDVYAFGVILLELLTGKIAGEI----ICMVDLTDWVRMLDLEERV-SECYDRHIAPQALDGMLRIALRCIRSASERP-EVRTVFEDLLSLSS----- | |||||||||||||
9 | 6egdD | 0.12 | 0.10 | 0.82 | 1.05 | MUSTER | ------------------------------------GSRF----HSFSFYELKNVTNNFDERPISVGKMGEGGF-GVVYKGYV-NNTTVAVKKLATT--EELKQQFDQEIKVMAKCQNLVELLGSDGDDLCLVYVYMPNSWHMRCKIAQGAANGINFLHE--NHHIHRNIKSANILLDEAFTAKISDFG--LARATAYMAPEALREITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT------ | |||||||||||||
10 | 3igoA | 0.11 | 0.09 | 0.77 | 0.64 | HHsearch | -----------------------------------QGTFAERYNIV--------------------CMLGKGSFG-EVLKCKDRTQQEYAVKVINKASAKNKTSTILREVELLKKLDNIMKLFEISSSFYGGELFDEIRFSEDAARIIKQVFSGITYMHK--HNIVHRDLKPENILLESKCDIKIIDFGLQQNTTAYYIAP-EVGTYDEKCDVWSAGVILYILLSGTPPFYGKNE-------YDILKRVETKYAFDL----PQW-RTISDDAKDLIRKMLTFPSLRI-TATQCLEHPWIQKYSSETP | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |