Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | KTAAKKTTARKTVAKKATAKKTAGGGAVRKTAAKKTTARKTVAKKATAKKTAIRKPAVRKAVRKTAAKKTTARKTVAKKATAKKTATRKPAVRKAVRKTAAKTTTARKPAVRKAARKPAGRKSVAKPAMSCHKHHKHTASCQRVCASSAKRRCGSKSRVRTAHGWRQQLMKLVSR |
1 | 3jywZ | 0.06 | 0.02 | 0.30 | 0.77 | DisCoVER | | ---------------------------------------------------------------------------------------------------------VNV-PKT-RKTYCKGKTCKHTQHKVTQ---TTKKVV--LR--LE--CVKCKTRA--QLTLK--RC-KHF- |
2 | 3cf4A1 | 0.03 | 0.02 | 0.81 | 0.83 | DEthreader | | -NAGPTLFPEGYRDWNFKLLRYEPVINGFFLRVITGTACHAAGRLTNITISTGLV-PAMEYVEEQLTQ-------LLATVH-GQ-E----IDYDSKALFSGSLDHVGME--DGRGQVSDAEIR-------------NAHITGAAEKVAIFAQ---RTLENEIDYILNVCNIPALL |
3 | 4qtqA | 0.13 | 0.13 | 0.98 | 0.62 | CEthreader | | ---KMPSTANAKLNEQGEISADIGGIAVSVHAQSCTEDSPGIMLCNRSPVVALEPEALYVDSNSTFYHGPLDDTYKKNRHSIIKEGNYGGPSYSVYLFDAAQKTLVFNQSLSDITVMANGLFSVKGNMLTSTSGHVFDTYELKLIERLTEDTNDPANPKKKIERLQDGEMKEVSN |
4 | 6yxuD1 | 0.10 | 0.10 | 0.97 | 0.57 | EigenThreader | | PEKDGLFCEKIFGPTRDWECYCGVEVTRAKVRRERLEAEMAVEKKAVEDQRDADLEARAQKLEADLAELEAEGA--KSDVRRKVRDSGEREMRQLRDRAQRELDRLDEIWNTFTKLAPKQYGEYFIKKLIENFDIDAEAESLREVIRSGK---GQKKLRALKRLKVVAAFQQSGN |
5 | 4o5jA2 | 0.28 | 0.07 | 0.25 | 0.32 | HHpred | | ---------------------------------------------------------------------------------------------------------------------------------AAQTATKGNNLCALSCAAT---SNPPNSTVSNALNLAQQLMDLIAN |
6 | 5dfzA | 0.07 | 0.06 | 0.84 | 0.45 | FFAS-3D | | ---------------------------LLEYSSQVHEEINEISSKIEDDFLSLKNQNHWYMRTVQKSIETLEKEVLQRKKSKKNIEMAQLESNDTINHSKTELSLMSQDESINDDYGSIYSRFVQIKDRLDQLRFKKLYQLIGIFHSTDLFNSDRGEYVNSQLGYYLLFLHLTA- |
7 | 6ybtu | 0.04 | 0.03 | 0.77 | 1.14 | SPARKS-K | | ---------QTIEERKERLESLNIQREKEELEQREAELQKVRKAEEERLRQEAKEREKERILQEHEQIKKKTVRERLEQIKKTELGAKAFKDIDIEDLEELDPDFIMAKQVEQLEKEKKELQERLKNQEKKIDYFERAKRLEE-------------------------------- |
8 | 6yvuA | 0.05 | 0.04 | 0.76 | 0.83 | DEthreader | | -------------------SIETNGETRMKMLNEFVKKTSEEIDNEEELQKEKELHK-S-KLENKENGLLNEIRKTSLSIKVENLDTEKSKALESEIASSSAKIEKSATEKDKMEQSKQRDLYKRKEELVS-TLADGYEKDMKEYD----------------SSKLNELK-E--- |
9 | 5gaoE | 0.22 | 0.22 | 1.00 | 0.78 | MUSTER | | AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
10 | 3cf4A | 0.03 | 0.02 | 0.81 | 0.83 | DEthreader | | -NAGPTLFPEGYRDWNFKLLRYEPVINGFFLRVITGTACHAAGRLTNITISTGLV-PAMEYVEEQLTQ-------LLATVH-GQ-E----IDYDSKALFSGSLDHVGME--DGRGQVSDAEIR-------------NAHITGAAEKVAIFAQ---RTLENEIDYILNVCNIPALL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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