>PF07355 (347 residues) KIKVVHYINQFFAGIGGEEKADYKPEIREGVVGPGMALNKEFNGEAEIVATIICGDSYFN ENVEEAKAEILKMVKEQDPDLFIAGPAFNAGRYGVACGTIADAVQTELGIPAITGMYEEN PGADMYKKSVYIVSTKNSAAGMRDAVKKMAPLALKIAKGEEIGSPEEEGYIPRGIRKNYF TDKRGSERAVEMLLKKLKGEDFVTEFPMPDFDRVDPQPAIKDLSKATIALVTSGGIVPKG NPDHIESSSASKYGKYDIEGFDDLTSEDHETAHGGYDPVYANEDPDRVLPVDVLREMEKE GKIGKLHRYFYTTVGNGTSVANAKKFAEEIGKELVADGVDAVILTST |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | KIKVVHYINQFFAGIGGEEKADYKPEIREGVVGPGMALNKEFNGEAEIVATIICGDSYFNENVEEAKAEILKMVKEQDPDLFIAGPAFNAGRYGVACGTIADAVQTELGIPAITGMYEENPGADMYKKSVYIVSTKNSAAGMRDAVKKMAPLALKIAKGEEIGSPEEEGYIPRGIRKNYFTDKRGSERAVEMLLKKLKGEDFVTEFPMPDFDRVDPQPAIKDLSKATIALVTSGGIVPKGNPDHIESSSASKYGKYDIEGFDDLTSEDHETAHGGYDPVYANEDPDRVLPVDVLREMEKEGKIGKLHRYFYTTVGNGTSVANAKKFAEEIGKELVADGVDAVILTST | |||||||||||||||||||
1 | 1o6cB | 0.09 | 0.06 | 0.65 | 0.57 | DisCoVER | KKLKVTVFGTRPEAIKAP---------------LVLELK----YPEIDSYVTVTVLFNIK-ITSNALVRLDELFKDIKPDIVLV-HG--D---TTTTFAGSLAAF-YHQIAVGHVEAGLELNR-QTGAIALHFAPTGAKDNL-----------------LKENKKADSIFVTGNTA-----------ID--A---------LNTTVKIL-L--T------APENFKAIRIVVSHFILTDSGGVQEEAPSLGKPVLV-L-----RDTTERPEGVAGTLK------LA----G-----T----DEENIYQLAKLLSASNPY--G---D----------------GEAS- | |||||||||||||
2 | 5zvs2 | 0.06 | 0.04 | 0.72 | 0.67 | DEthreader | ---------------AA-TWRLTYKL------------TNPDDVYVIAQARPILFLLLQDPTSPALHAIWQVMQYYPVVSYLTDISLILAHMTDMPLELTGVLMYLRASSTLLKSFP-LVRFVRDVMALTSGMY-VVINVDIKAC-A------SDAFSS------K--SRHPGKLIDIIGLNGVTVLNWREWLRFSWAFACYSS---------------------------YLGIPPILPFIHSCYMPPQG-SINGWRWLLLSQFGVAGYAAQ---------------PTHSFSR-LE----L-LRVHVALLSIPSSWMTLNTGPYIHAYDFKTAVTEIALSNL--- | |||||||||||||
3 | 3s99A | 0.08 | 0.07 | 0.85 | 0.52 | CEthreader | KLKVGFIYIGPPGDFG----------WTYQHDQARKELVEALGDKVETTFLENVAE------GADAERSIKRIARA-GNKLIFTTS-------FGYMDPTVKVAKKFPDVKFEHA------TGYKTADNMSAYNA-----RFYEGRYVQGVIAAKMSKKGIAGYIGSVPVPEVVQGINSFMLGAQSVNPDFRVKVIWVNSWFDPGKEADAAKALIDQGV-------------DIITQHTDSTAAIQVAHDRGIKAF---GQASDMIKFAPDTQLTAVVDEWGPYYIDRAKAVLDGTWKSQNIWWGMKEGLVKMAPFTNMPDDVKKLAEETEARIKSGELNPFTGPIK | |||||||||||||
4 | 3iuuA | 0.09 | 0.08 | 0.88 | 0.60 | EigenThreader | SILVGQIWHEGFNPILT----REKDFLFGSSTALSGIVKTAEALGYRCSISARARPI----EQKVFDNIVDEFVQAARQDFLDLHGATLAEHTLDTEGYLLSRLREVVGIISLALDLHAYLTPQVEQATIITSFRTTPHADIEETGVRAGAAADRWRARSVHPFL--DVPGYGQVVLAYDNGSGAAIDACRDLSD--------LWKARDEFQEQLSVDKALEIARTLLALGDQGDR--------VGAGPGDSPEIARVALEHFPGLKVAVPVYDPQAVRTAREAGENVHDP----AFYEAVGVPLASQQAVVARAANHY-------------KLSFADIARTITVDT | |||||||||||||
5 | 1mioB | 0.13 | 0.12 | 0.90 | 0.37 | HHpred | ---------------------HNCLPHSHGSQGCCSYHRTVLKEPAMASTSSFTEGASVFGGGSNIKTAVKNIFSLYNPDIIATTCL--SETLGDDLPTYISQMEDAEGKLVIHTNTPSYVGSGIVNGKINVIPGFVGPADMREIKRLFEAMDIPYIMSGVLDGPTTGEMYPEGSDLTLSLGSYASDLGAKTLEKK-CKVPFKTRTPIGVSTGKEVPAAQQYLQGKKVALLGDPDEIILGIPKYVVTGTPGMFQK-EIDAMAEAGIEGSKVKVE-GDFFWKNEGVDLLISNTYGKFIARENIVGPIMDRYNPKVGYKGAIRLVEEITNVILDKIERECTE------- | |||||||||||||
6 | 1mioB | 0.13 | 0.09 | 0.70 | 0.45 | MRFsearch | -----------------------CLPHSHGSQGCCSYHRTVLSEPAMASTSSFTEGASVFGGGSNIKTAVKNIFSLYNPDIIAVHTTCLSETLGDDLPTYISQMEDAGSIPEG--------------KLVIHTNTPSHVTGFANMVQGIVNYLSENT-------------GAKNGKINVIPGGPADMREIKRLFEAM---------------------------DIPYIMFP-------DTSGVLDGPTTGEYKMYPIEDLKDTGNSDLTLSLG------------SYASDLGAKTLEKKC------KVPFKTLRTPIGVSATDEFIMALSEATYLQGKKVALLG-- | |||||||||||||
7 | 3ot5A | 0.15 | 0.12 | 0.79 | 0.53 | FFAS-3D | KIKVMSIF-------GTRPE--------AIKMAPLVLALEKEPETFEST-VVITALDQLAEITSRVMNGINEVIAAENPDIVLVHGDTTT-------SFAAGLATFYQQKMLGHVEATGNTAIDALGDNRLILMTAHRRENLGEPMQGMFEAVREIVESRE--------------DTELVYPMHLNPAVREKAMAILGGHERIHLIEPLDAIDF-----HNFLRKSYLVFTDSGGVQEMGVP---------VLVLRDTTERPEGIEAGTLKLIGTNKENLIKEALDLLDNKESHDKMAQAAN----------PYGDGFA---ANRILAAIKSHFEETD--------- | |||||||||||||
8 | 3beoA | 0.13 | 0.10 | 0.78 | 0.63 | SPARKS-K | RLKVMTIFGTR------------------PEAIKMAPLVLELQEKIESIVTVTAQHRQMLDQTTRGLEGLDKVMKEAKPDIVLVHGDT-------TTTFIASLAAFYNQIPVGHVEAGLRTPEEMNRQDLHFSPTAKSATNLQKTAIDALKTTHPVLEKLG----NNRLVLMTAHRR--ENLGEPMRNMFRAIKRLVDKHEVQVVYPVHMNGRIHLIEPLDVAARSYLMLTDSGGVQELGVP--------------------------VLVLRDTTERPEGIEAGTKLAGFSLADELLSDDKMSKASNPY-------GDGRASERIVEAILKHFNK----------- | |||||||||||||
9 | 3i09A | 0.11 | 0.08 | 0.78 | 0.97 | CNFpred | SVKIGFITDMSYADIDGQGGLE----------AIKMAVADFGKVNGKPIEVVYADHQ---NKADIAASKAREWMDRGGLDLLVGGT------NSATALSMNQVAAEK-KKVYINIGA---GADTLTNCTPYTVHYA---YDTMALAKGTGSAVVKQ----------------GGKTWFFLTAYAFGKALEKNTADVVKAGKVLGEVRHPL-SASDFSSFLLQAQKAQILGLANAGGDTVNAIKAAKEF---------------GITKTMKLAAL-------------LMFINDVHALGLE----TTQGLVLTDSWYWNRDQASRQWAQRYFAKMKK-MPSSLQAADY | |||||||||||||
10 | 3lxuX1 | 0.08 | 0.07 | 0.79 | 0.83 | DEthreader | RDVTIAIFDS-GVDP---DCSGCGDEYSETGTHVSSIASGVDGVAPNAKIVSTIGDLETGTALV-RAT-KVELCRDGRRIDVIN-SYGEHAN--SGRIGELNEVVNKYGVVWVASAGNHVGTPDISQPSLIGVGAYTWLNGTSAAPHVAGAVALLISGLIAISVAGHGLL--VDKGIHSIDRVDPTGLQP-VH-A-------IPVTVVRFNQKVFRGVEAHKLEIVQPQL--------------------------QLK-N-AEVVLDVSIYNDLAHSHANLVASF----PL-LDFYYCIGYIAPI-LSGNL--------------V-PQDEVGRR----VAQHPF- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |