Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | KYIFGGEWSNSVTQAIDYIVSIKNMVDTSSVGGRRMFYTICYTVARKYLHQFNNNVLALNTIQTLLDSIIQAEQMLFSRSLLLDFCVRFLINNSDGQNLQCLINTQLLDYLLNKYD |
1 | 4uvkA1 | 0.10 | 0.09 | 0.87 | 1.00 | DEthreader | | DLSI---DELLRD-SLSYDRRFLQVDVHSSNETVLQ-LF-----HL--S---SKYPPLYANFVEFMFRLMDVANDLLLYTGLIIDLLTWLSPLSCKIRSLRYIATLTLYLFQDFLH |
2 | 4uvkA1 | 0.13 | 0.11 | 0.87 | 1.00 | DEthreader | | ----TSEDLSIDELLRDSLESYSQDR------D-RFL-QEFINLLCC-LS-SKYPPLY-ANFVEFMFRLMDVANDLQLLYGLIIDLLTWLSPLSCKIRSLRYIATLTLYLFQDFLT |
3 | 1ialA1 | 0.12 | 0.09 | 0.74 | 0.65 | DisCoVER | | KRRNVRKLLSQP-PIDNIIGLIPKFVFLGKTDCSPIQFESA----------------------WALTNIASGTSEQ--TKAVVDGAIPAFISLLASHAHI---SEQAV-WALGNI- |
4 | 5h64A | 0.06 | 0.05 | 0.88 | 1.00 | DEthreader | | ---YPAV---MKKLHVSTINLQKAWG-AA---RRVSKDDWLEWLRRLLSCWALQYPMARDLFNA-AFVSCWS-ELNEDQQDELIRSIELALTDIAE--VTQTLLNLAEFMEHKGPL |
5 | 5oqnA1 | 0.14 | 0.14 | 0.97 | 0.49 | CEthreader | | VFQKAQGSYAGHRKHIAVLKKIQSKA--VEQGYEDAFNFWFDKLVTKILP-LKKNEIIGDRIVKLVAAFIASLERELIFSRFVDQFIRHVLRGVESDKNVRFRVLQLLAVIMDNIG |
6 | 6b4fB | 0.05 | 0.05 | 0.95 | 0.65 | EigenThreader | | DLQKAATSTIAGSKLKEIFDKIHSLLSGNPQGLDFVQYKLAEKFVKQGEEE---VASHHEAAFPIAVVASGIWELH---PRVGDLILAHLHKKCPYSVKRMSGMIRLYAAIIQLRW |
7 | 5oqnA2 | 0.12 | 0.11 | 0.97 | 0.28 | HHpred | | -MLELVNTPLTENILIASLMD--TLITPAVRNTAGLCCLLDVKLAIDNMMSKGNASLKYIALQVIVDIFSVHGNTVVDGISLHKIFYKVLKNNGL-PECQVIALVQAFAFCIPVYC |
8 | 6yvuD1 | 0.16 | 0.14 | 0.89 | 0.30 | MRFsearch | | ------------GIMLRQMNLVITLLNNSSITLRCSVVEACGNIVAELAQDPQTMEHYKQQIAVLIELLEERFQNPYVRTKAIQGCSKICDLLQDRSSLVRRNSVKLLSKLLLKH- |
9 | 4c0eA1 | 0.09 | 0.09 | 1.00 | 0.68 | FFAS-3D | | EYVFDENNPHATERAAIFVHQLHSVQLVTNRDEFLLFLRHALDKSVERFEQGIHSGASIAESFQAVEALVKLIIIFVKSDSILALGVLVANSHHVGENFNQRVFYRFFALLLHEVG |
10 | 4fgvA | 0.07 | 0.07 | 1.00 | 0.64 | SPARKS-K | | LARQVDGSEWSWHNCNVLCWAIGSISMAMNEETEKRFLVTVIKDLLGLTEMKRGKDNKAVVASNIMYIVGQYPRFLKAHWKFLKTVVNKLFEFHESHEGVQDMACDTFIKIAKQCR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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