Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | MRYKLKILTRAKTHKYVLKDIPMYEWDNVLGFDVERDELINKLNDLKTLKEITKLMISRGFLDEFYEILNKERRYSELYKYALPIILFLVQYSLFQTIEGFKKPGLVYIESFQDRNGDYIKYDYIDERWSYDFLITSSKSLGLNQEDSLEANLEPLLKEGVNE |
1 | 4kw3A | 0.06 | 0.06 | 0.87 | 0.71 | DisCoVER | | --PVIRAFSQ-----PAFTYVFKFPYEWLLHALL-------AHGTEQSMIQLR-NCAPH-EDIIRDDLLISLEDR--HFGAVLCKAVYATTTLMSHKQRNMFPRCDIIVQSELGEKNLHCHIIVGGEGL-IIQRCKSLEEIFLTNM-QILAQTVDPLTLING- |
2 | 7reqB1 | 0.07 | 0.06 | 0.78 | 0.83 | DEthreader | | ---------VHTID--FTRGTTVRAWDVRALVTSLLVEVFANLGLDPIGFAANIYHNAGAGVAELAWALAAEYVAFDTI-NF--RV---T---AT-------HDQFTILRRWAGEDKRGARQ------RSIATFSTVLAEEVNIGRV-NDP-AGGS-YYVESL |
3 | 1aqzB | 0.08 | 0.07 | 0.85 | 0.52 | CEthreader | | ATWTCINQQLWEDKRLLYSQAKAESNSHHAPLSDGKTHWFTNGYDGNGKLIKGRTPIKFGKADCDRPPKHSQNGMGKDDHYLLEFPTFPDGHDYKFDSKKPKENPGPARVIYTYPNKVFCGIVAHQRGNQGDLRLCSH------------------------- |
4 | 2d4vA | 0.04 | 0.04 | 0.99 | 0.65 | EigenThreader | | YVCLRPVRYPEKVDMVIFRENSEKPVSHKGNIMKFTEGGFRDWGYALAEREFRQKAAISKAEGKAAGQKAEQQAIADDNFLQQILLRLNGDYVSDALAAEVGGIGMAPGANLS--DTHAIFEATHNPSSLILSAVMMLEHLGWGEAAQAIVAAMNATIAAGEV |
5 | 6q45G | 0.19 | 0.12 | 0.64 | 0.35 | HHpred | | ---------------------------------PGMKEIKSRIKSVQSTRQITNAMVSTTKFKRYSKLVTESRPYEESMRKILGNIASGVKHPLFDGRKEVKSIAIIVITSDRGLCGSFNSLKEVFGRKAIDFITKRN------------------------- |
6 | 7jg5G | 0.20 | 0.12 | 0.63 | 0.53 | MRFsearch | | ------------------------------------RELRGRIRSAGSIKKITKALIATSRIAKAQARVEAARPYAAEITNMLTELAGASDHPLLVERKQPKRAGVLVVSSDRGLCGAYNANV----------------------LRRAEELFSLLRDEG--- |
7 | 2gs4A | 0.20 | 0.15 | 0.75 | 0.48 | FFAS-3D | | --------------------------------KTIEDVFIHLLSDTRALAKLARATSNEKLSQAFHAHLEETHGQIERIDQVVESELIEEANEVIESTEKNEVRDAALIAAAQ--------KVEHYEIASYGTLATLAEQLGLEEEKATDIKLTDLAINNVNK |
8 | 6djyA | 0.13 | 0.10 | 0.83 | 0.55 | SPARKS-K | | RQPPMDNLSSGTSF------LPLERDVEIVGFKGSHICMFSNLRQMPILCPYYDLITNFKTTTEIRAYVDAHEELKSLLTYLCLCTIVGLC-DTFTETRNM-------------DTGEY--------VWKVRDVVSRNHTPAQNVECYTIQNAKYMIQLVHVL |
9 | 3k6pA | 0.12 | 0.09 | 0.72 | 0.47 | CNFpred | | ------------------------------------VATLCDLFD-REIVVTISWAKSI----PGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPL-----QDELAFAEDLVLDEEGARAAGLGELGAALLQLVRRLQALRLEREEYVLLKALALANSDSVH |
10 | 6vkzA2 | 0.10 | 0.07 | 0.74 | 0.83 | DEthreader | | DKYYYYPITIDVKFYCPFEPSPYSS-D-----SDLTHERFSYEAYTNAFMELENRCIKMQALKLKEEILESASDERLALARMIKTREDSLIGYVLH---------EVC--------------------DHKPLMKAFLEEEITKSLAEKVKFNPV-------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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