Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MGPFRVDQFPDNYPAFLAVSTSCFLRYNKWCILGIHQEIEALTLEEGEVFLQFQKEVKKLLRLKVNFQRKCSLYEKIYKKYVYNVPEKKGESSKCVAEEEEDYYEFEEIPMEETCDKKQDSEVKDV |
1 | 3k1qI4 | 0.03 | 0.02 | 0.70 | 0.80 | DisCoVER | | ITGDGNSFT-------P-TSDMTSTALPDISAGSASCNWKSLAFAKTYPNEFY-NVAIHRY---P-------ALK--P--GNPTLPD------AQAH--------PLGEAGAFNAALRARQTKQF- |
2 | 6ercA | 0.05 | 0.04 | 0.78 | 0.83 | DEthreader | | WFLNDGNVGNSEICKNLRSLEMKMTVGDLPPKYSVGERRGNENPGLLSIHTLLLRDHNRLARKADDERVFQQSRSCIIEQ-IQKWYETEMMVNRECET--R------------------------- |
3 | 3emlA1 | 0.06 | 0.06 | 1.00 | 0.62 | CEthreader | | WLNSNLQNVTNYFVVSLAAADIAVGVLAFAITISTGFCAACHGCLFIACFVLVLTQSSIFSLLAIAKGIIAICWVLSFAIGLTPMLGWNNCGQSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLV |
4 | 4xt1A | 0.05 | 0.05 | 1.00 | 0.70 | EigenThreader | | GNFLVIFTITWDVYFINLAAADLLFVCTLPLWMQYLLDPCTLLTACFYVAMFASLCFITEIALDRPVKQACLFSIFWWIFAVIIAIPHFMLEVSYPIILNGAFVIPLSVISYCYYRISRIVAVSQS |
5 | 4s3kA | 0.18 | 0.15 | 0.85 | 0.29 | HHpred | | -ANIENGAFSDVGRAILNLLNNIVKTAKEQNFRDIHFDFEFLRPADKEAYIAFLQKAKKRLQDEMSVALEAHDYKAIGETGGPPMA-----VSPIGPVRDV-LEYASEIPSSKI------------ |
6 | 2lyyA | 0.15 | 0.09 | 0.59 | 0.38 | MRFsearch | | ----NENAFYARATELIKLANQQNARYNAWFGSTSFETKEQMQAKKQEMMDYYMDRYKEMLD------ANMEDYIENFDHYRAT------------------------------------------ |
7 | 1cmzA | 0.20 | 0.13 | 0.65 | 0.42 | FFAS-3D | | --PSEVQSWAQSFDKLMPAGRSVFRAF--------------LRTEYSEENMLFWLACEELKAEANQ-HVVDEKARLIYEDYVSILSPKEVSLDSRVREG--------------------------- |
8 | 6yx5B2 | 0.12 | 0.11 | 0.92 | 0.56 | SPARKS-K | | FYNKAIKDFTAPKTHIM--------RPIDFMLMGLREEFN-LYSEDG-AHLSAPGTIRLLREKNLLPEEQIARIESVYNQAMSKRFEAEHKKEHDEMPYSDAKAMLDEVAGVQRVTRIENLENAKK |
9 | 5ujaA | 0.11 | 0.06 | 0.52 | 0.51 | CNFpred | | -------------VRLECVGNCIVLFASLFAVISRH----SLSAGLVGLSVSYSLQVTTYLNWLVRMSSEMETNIVAVERLK-------------------------------------------- |
10 | 6r9tA | 0.06 | 0.06 | 0.89 | 1.00 | DEthreader | | VATAGTASVNLDAVGCAVTTISSNLTEMSRGVKL-LA--LLSGRPLLQAAKGLAGAVSELL-RSAQPRNLLQAAGNVGQASGEPAPTISCQELVEAGLVAKAEGCVSQAAT-EDG-LL-------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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