Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | RFGGAGYEVAELSRQQERHYRLLSELQELVKALPSSCQQRLSYTTLSDLALALLDGTVFEIVQGLLEIQHLTEKNLYSQRLKLHSEHRGLKQELFHRHKEAQQCCRPHNLPLLRAAQQREMEAVEQRIREEQRMMDEKIVLELDQKVIDQQSTLEKAGVSGFYITTNPQELTLQMNLLELIRKLQQKESESEK |
1 | 4uosA | 0.04 | 0.03 | 0.88 | 0.77 | DisCoVER | | -----------------NEEVKKMLEKMI-EEIKKMLEKAI-KKVKEMLEKMI-KEIKKMLENGSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILVKELGVDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKML--ENGDSILKAKEMAEKILKMVIELAEKILKKAKEMAILKVK- |
2 | 2j69A | 0.07 | 0.06 | 0.85 | 1.00 | DEthreader | | -------------------GDSSSGKL-SL-ERDIACHTREAVARRIPLLEQDVLKKRIDSVEPEFNKLTGIRDEFQKEIINTRDTQARTISESFRSYVLNL-GNTFENDFLYIDKSAAWTLTAEKDINAAFKELSRSASQYGASYNQITDQITE-KLTGKDV--EDNS-PG--IDDIVSRKSELDNVKQQT- |
3 | 4dylA | 0.12 | 0.11 | 0.99 | 0.70 | CEthreader | | LQQMQEAELRLLEGMRKWMAQRVKSDREYAGLLHITSQTEGLSRLLRQHAEDLNSG-PLSKLSLLIRERQQLRKTYSEQWQQLQQELTKTHSQDIEKLKSQYRALSLWKLFAHHNRYVLGVRAAQLHHQHHHQLLLPGLLRSLQDLHEEMACILKEI-LQEYLEISSLVQDEVVAIHREMAAAAARIQPEAEY |
4 | 5c1fA | 0.06 | 0.06 | 0.97 | 0.88 | EigenThreader | | -MDKSELRSFYHERANIEEDYAKRMAKLSRLKESVQVMKAEVDNMAKSHLQISQ--LLQDDVKDKKKMIVSGIEKVHKDKLSKHQALVKAQDKYHYLVNYYVSQQNMLNNAKLNKTQNADYQSAVAAVRDSYARWTNEWRSTCDKLQDWTFTLLISRSCFN---DDQACERIRKNLEQQDVLEFIDAKSTGTG |
5 | 6gmhQ | 0.18 | 0.11 | 0.61 | 0.35 | HHpred | | -------LMFNVALVLQRLATSV--L-------KD--EKSNLKE-------------VLNAVKELELAHRYFSYLATEARSDLLSQAQYHVARARKQDEE---------ERELRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTK----------------------------------- |
6 | 1f5nA | 0.18 | 0.15 | 0.85 | 0.48 | MRFsearch | | ------VDHLFQKELAAQLEKKRDDFCKQNQEASSDRCSGLLQVIFSPLEEEVKGIQAEEILQTYLKSKESMTDAILQTDQTLTEKEKEIEVERVKAESAQAS---AKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLA-------------LKLQEQEQLLKEIQDLQTK------ |
7 | 6rz6A2 | 0.07 | 0.06 | 0.79 | 1.00 | FFAS-3D | | -----------YKIAKLQTMNYIALVVGC---------------LLPFFTLSICYLLIIRVLLKVEADLEDNWETLNDNLKVIEKAAAQVKDALTKMRAAALDAQMKDFRHGFDILVGQIDDALKKEAQAAAEQLKTTRNAYIQKYLVSHRKALTTIIITLFFLCFLPYHT---LRTVHLTT----------- |
8 | 4uosA | 0.12 | 0.10 | 0.86 | 0.87 | SPARKS-K | | ---------GDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEIKEIKKMLENGEDS------EKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVDN---------EEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLENG---EDSEKILKKAKEMAEKILKMVIELAEKIL |
9 | 3o1hA | 0.12 | 0.11 | 0.90 | 0.63 | CNFpred | | ------------KEAGRVLFEQLESLLTHIKELGGESF---DSKLLDALESNVQVINNLAELGVTVERKLWLAKEIDTRVEEMRLLSEELEQLTRTQVQNTSTIANVTHIYDLLEANKKDQVYQALDALVEVDLDLTERLHELHLLAFKMLNQIEEA-----RTLTNVDRIQIQTAFENNLKIMKRRVLAVED |
10 | 5owvC2 | 0.08 | 0.07 | 0.80 | 1.00 | DEthreader | | ------------SFKGRIQELCKELNE-PF--M---H---SY-ALENELKELVVKINLCEILEDENQLFVGIFDRLLNQFQSYEKHLLLAYENFLKEIEILNHQILEQLKIKELYKSFEEIKMKLKDFINILEREILLFKAEFSN-IQ--KDH-I---FQSDKNFS-E--A------LQKRRAQILNESEDHH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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