>PF07290 (219 residues) NWPFMVSLTIMVMIACLEGVSTLIGMGFSSMIESLIPDFNMDVDADMDVDANAGANSGIG PDHPNISTTGILTKTFGWLRIGQIPVLIILIAFLTIFGLVGFFIQSVVVKITGHLLPGII ASAISFLLTLPLVRAATGIIVKIMPKDETQAVAEKSFIGRIAVITLGKASKNNPAQAKVR DKFGTAHYVMVEPDIDDENFAQGDQVLIVKQTGFGYKAI |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | NWPFMVSLTIMVMIACLEGVSTLIGMGFSSMIESLIPDFNMDVDADMDVDANAGANSGIGPDHPNISTTGILTKTFGWLRIGQIPVLIILIAFLTIFGLVGFFIQSVVVKITGHLLPGIIASAISFLLTLPLVRAATGIIVKIMPKDETQAVAEKSFIGRIAVITLGKASKNNPAQAKVRDKFGTAHYVMVEPDIDDENFAQGDQVLIVKQTGFGYKAI | |||||||||||||||||||
1 | 2k14A | 0.15 | 0.05 | 0.31 | 1.03 | DisCoVER | ---------------------------------------------------------------------------------------------------------------------------------------------------ESLAYREDDLRGRLGKVI-TAVPVDGFGEVVIEGI-GGTISKSAVSFDN-QQISYGTTVLVVDINNGVLSV- | |||||||||||||
2 | 2k14A | 0.14 | 0.05 | 0.35 | 1.07 | HHpred | -------------------------------------------------------------------------------------------------------------------------------------------SHMLESSAESLAYREDDLRGRLGKVITAVP-VDGFGEVVIEGIGGTISKS-AVSFDN-QQISYGTTVLVVDINNGVLSVT | |||||||||||||
3 | 7d7nA | 0.09 | 0.09 | 0.92 | 1.04 | SPARKS-K | WFGLIVFLCMSLYLTLTIVVTEWRTKFRRAMNTQENATRARAVDSLLNFETVKYYNAESYEVERYREAIIKYQGLEWKSSASLVLLNQTQNLVIGLGLLAGSLLCAYFVTEQKLQVGDYVLFGTYIIQLYMPLNWFGIDMENMFDLLKEETEVKDL----------PGAGPLRF-------QKGRIEFENVHFSYADGTVMPGQTLALVGPSGAGKSTI | |||||||||||||
4 | 5ez3A | 0.09 | 0.07 | 0.79 | 0.83 | DEthreader | NAYDAGAARFYTAALCLTMTAS-GMGMTEKQGGTDVRANATRTGHKMFLCFLLPGE-GALGQM--SPGEG-VKTIMDMVTL-TR--LDCAVASAGLMRSGLAEA-HH--HR----GNGIENLARAYRE-APVNAIWGSGVMALDVRVLSPA----------ISGQL----------GTIDRA-LQ-QLAFAAA----DIADA-IETLGGLWRT---MLD | |||||||||||||
5 | 3cp0A | 0.14 | 0.04 | 0.27 | 0.66 | CEthreader | --------------------------------------------------------------------------------------------------------------------------------------------------------SPRALVGHRAEVLEDV--GATSGQVRLDG-----SIWSARS-DPTHTFAEGEIVSVIDIQGTTAIVW | |||||||||||||
6 | 5cuvA | 0.08 | 0.06 | 0.72 | 0.70 | EigenThreader | VK--------------PLPEACKRNVTEFDLVAYGKDEFTLSEKRVARFSAFDVTQLGYQKSEINAIDGHFEKFWAWWCSHPEV----------------------PYFRDETGKELQVSPWHDIP------------------LVRTKPASLP----NRYNFICEIPRKHGDWNYGALPQTWENDPIDAIEI---GTQFKVGQVVKVLGILGDWKVIC | |||||||||||||
7 | 5ijiA | 0.08 | 0.06 | 0.70 | 0.27 | HHpred | -RAFFYIVLLSILSTGALLTLASSL-RDAEAINIDSGSPQLNAHR-QLFQQALHSPVL-TNLNVWYVPETRYAHLANWLEMGDLPWYQAINNYVNQILFVLALQHYAERKMLLVLAGGIGIFTLVFFTLRRIRHQVVAPLNQLVTASQR--IEHGQFDS------------------------------------------------------------ | |||||||||||||
8 | 4tq3A1 | 0.09 | 0.05 | 0.54 | 0.83 | MRFsearch | --SLQHAVLGLLSFAFWMAFSFTINALYDRDVDRLH------------------DGLNLSMQPLVTGEISVREAWLYCIAFLALSLATAAAIKFFLAMLGANIIGYVYSAPPAWPVMDVICNALAAVLAFYAGLSIGGA-------------------------------------------------------------------------------- | |||||||||||||
9 | 6mjpF | 0.09 | 0.07 | 0.79 | 0.67 | FFAS-3D | -KSQFAIFFVLFLVFLSQKFIRVLADMILSIVG------------------------------------LNMPAMGLLM----LPLSLYIGILLTFGRLYGIGNKFLIRAAL---YLALITASVAAFNALWLAPWSQDKEAHLMEQFADLLQKGHRSPDGSSVVFIDNIENRKLYNVFVAQLAPRDSILPSVMFSHSGDVKEDGRQIITLYDGTRYE-- | |||||||||||||
10 | 5kk2E | 0.10 | 0.06 | 0.67 | 1.03 | SPARKS-K | ---RGVQMLLTTVGAFAAFSLMTIAVGTDYWLYSRGEVMTHSCNFKGLCKQIDHEDADYEADTAEFLRAVRASSIFPILSVILLFMGGLCIAARHNIILSAGIFFVSAGLSNISFYFGALSFIIAEMVGVLAVHMFIDRHKQLRATARAT--------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |