>PF07289 (334 residues) LWEDRDVRFDISPQQMKMRPGEILIDRLDSVEDTKGNNGDRGRLIITNLRIIWHSQTLPR VNLSVGYNCIVNITTRTANSKLRGQTEALYILTRCNNTRFEFIFTNLVPGSPRLFTSVIS VHRAYETSKMYRDLKLRGALINNKQLKLLPQEQVYDQINGVWNLSSDQGNLGTFFITNVR LVWHANMNDSFNVSVPYLQMRTVKIRDSKFGLALVLETSVQSGGYVLGFRIDPVEKLQEV VKEIQSLHRVYSASPVFGVEFENEDKPQGLEDLMIETVQDDVEIVNEDEQSDAFAAYFAD GDKQKDRPPVYSEELGLAIEKLKDGFTLSGLWEV |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | LWEDRDVRFDISPQQMKMRPGEILIDRLDSVEDTKGNNGDRGRLIITNLRIIWHSQTLPRVNLSVGYNCIVNITTRTANSKLRGQTEALYILTRCNNTRFEFIFTNLVPGSPRLFTSVISVHRAYETSKMYRDLKLRGALINNKQLKLLPQEQVYDQINGVWNLSSDQGNLGTFFITNVRLVWHANMNDSFNVSVPYLQMRTVKIRDSKFGLALVLETSVQSGGYVLGFRIDPVEKLQEVVKEIQSLHRVYSASPVFGVEFENEDKPQGLEDLMIETVQDDVEIVNEDEQSDAFAAYFADGDKQKDRPPVYSEELGLAIEKLKDGFTLSGLWEV | |||||||||||||||||||
1 | 6vbu5 | 0.57 | 0.33 | 0.58 | 0.67 | DEthreader | ALWEDVRFDVSS-QQMKTRPGEVLIDCLDSVEDTGNNGDRGRLLVTNL-RIVWHSLALPRVNLSIGYNCILNITTRTANS-LRGQTEALYVLTKCNSTRFEFIFTNLVPGSPRLYTSLIAVHRAYETSKMYRDKLLPQENVYNKIN-----------GVWNL-S--G-NLGTFFITNV-RIVWHAN-----NVSIPYLQ------------------------------------R--AL--VI-ESSQQSGG--HKYSANP------------------------------------------------------------------------ | |||||||||||||
2 | 6vr4A | 0.06 | 0.04 | 0.73 | 0.67 | DEthreader | ---LHVNPGVLRQLLNTS-----Y-GQSSLWAKH--LLGEEK------------FVLGRE-S---------LSIFKKVRGTKNGTSIYSTV---------EIKIDHFIDFNSILASIYTFTFFKRVPAT-----VLENIVKP----DVNQTDAQKSQAVLLPQLVAGTQLQASIV-SFIQLSNFGL-KQTASDLKPPPGQIFSHVADAK------ALRA--PLQIVGILPEA----G-DTI-FIDKYVL--WLDLITPIDFAFIFIFIAVTFKGERGNDKTKYILVYRLKAYR--V--VY--Q--NE------------NITLA-NGYISADSR | |||||||||||||
3 | 6vbu5 | 0.84 | 0.75 | 0.90 | 16.71 | HHpred | LWEDRDVRFDVSSQQMKTRPGEVLIDCLDSVEDTKGNNGDRGRLLVTNLRIVWHSLALPRVNLSIGYNCILNITTRTANSKLRGQTEALYVLTKCNSTRFEFIFTNLVPGSPRLYTSLIAVHRAYETSKMYRDFKLRSALIQNKQLRLLPQENVYNKINGVWNLSSDQGNLGTFFITNVRIVWHANMNDSFNVSIPYLQIRSVKIR------ALVIESSQQSGGYVLGFKIDPVEKLQESVKEINSLHKVYSANPIFGVDY-----------------------------TDAFVAYFADGNKQQDREPVFSEELGLAIEKLKDGFTLQGLWEV | |||||||||||||
4 | 6vbu52 | 0.20 | 0.07 | 0.34 | 1.46 | DisCoVER | ----FKLRSALIQNKLRLLPQENVYNKINGVWNLSSDQGNLGTFFITNVRIVWHANMDSFNVSIPYL-QIRSVKI-----------RALVIESSQQSGGYVLGFKID--PVEKLQESV------------------------------------------------------------------------------------------------------------------------------------------EIN------------------------------------------------------SLHYSP--------I--FG-- | |||||||||||||
5 | 6vbu5 | 0.84 | 0.75 | 0.90 | 1.58 | MRFsearch | LWEDRDVRFDVSSQQMKTRPGEVLIDCLDSVEDTKGNNGDRGRLLVTNLRIVWHSLALPRVNLSIGYNCILNITTRTANSKLRGQTEALYVLTKCNSTRFEFIFTNLVPGSPRLYTSLIAVHRAYETSKMYRDFKLRSALIQNKQLRLLPQENVYNKINGVWNLSSDQGNLGTFFITNVRIVWHANMNDSFNVSIPYLQIRSVKI------RALVIESSQQSGGYVLGFKIDPVEKLQESVKEINSLHKVYSANPIFGVDYT-----------------------------DAFVAYFADGNKQQDREPVFSEELGLAIEKLKDGFTLQGLWEV | |||||||||||||
6 | 6vbu5 | 0.84 | 0.75 | 0.90 | 3.86 | SPARKS-K | LWEDRDVRFDVSSQQMKTRPGEVLIDCLDSVEDTKGNNGDRGRLLVTNLRIVWHSLALPRVNLSIGYNCILNITTRTANSKLRGQTEALYVLTKCNSTRFEFIFTNLVPGSPRLYTSLIAVHRAYETSKMYRDFKLRSALIQNKQLRLLPQENVYNKINGVWNLSSDQGNLGTFFITNVRIVWHANMNDSFNVSIPYLQIRSVKIRA------LVIESSQQSGGYVLGFKIDPVEKLQESVKEINSLHKVYSANPIFGVD-----------------------------YTDAFVAYFADGNKQQDREPVFSEELGLAIEKLKDGFTLQGLWEV | |||||||||||||
7 | 6vbu5 | 0.84 | 0.74 | 0.89 | 1.66 | MAPalign | LWEDRDVRFDVSSQQMKTRPGEVLIDCLDSVEDTKGNNGDRGRLLVTNLRIVWHSLALPRVNLSIGYNCILNITTRTANSKLRGQTEALYVLTKCNSTRFEFIFTNLVPGSPRLYTSLIAVHRAYETSKMYRDFKLRSALIQNKQLRLLPQENVYNKINGVWNLSSDQGNLGTFFITNVRIVWHANMNDSFNVSIPYLQIRSVKI------RALVIESSQQSGGYVLGFKIDPVEKLQESVKEINSLHKVYSANPIFGVD-----------------------------YTDAFVAYFADGNKQQDREPVFSEELGLAIEKLKDGFTLQGL--- | |||||||||||||
8 | 6vbu5 | 0.84 | 0.75 | 0.90 | 1.54 | CEthreader | LWEDRDVRFDVSSQQMKTRPGEVLIDCLDSVEDTKGNNGDRGRLLVTNLRIVWHSLALPRVNLSIGYNCILNITTRTANSKLRGQTEALYVLTKCNSTRFEFIFTNLVPGSPRLYTSLIAVHRAYETSKMYRDFKLRSALIQNKQLRLLPQENVYNKINGVWNLSSDQGNLGTFFITNVRIVWHANMNDSFNVSIPYLQIRSVKIR------ALVIESSQQSGGYVLGFKIDPVEKLQESVKEINSLHKVYSANPIFGVDY-----------------------------TDAFVAYFADGNKQQDREPVFSEELGLAIEKLKDGFTLQGLWEV | |||||||||||||
9 | 6vbu5 | 0.84 | 0.75 | 0.90 | 3.33 | FFAS-3D | LWEDRDVRFDVSSQQMKTRPGEVLIDCLDSVEDTKGNNGDRGRLLVTNLRIVWHSLALPRVNLSIGYNCILNITTRTANSKLRGQTEALYVLTKCNSTRFEFIFTNLVPGSPRLYTSLIAVHRAYETSKMYRDFKLRSALIQNKQLRLLPQENVYNKINGVWNLSSDQGNLGTFFITNVRIVWHANMNDSFNVSIPYLQIRSVKIR------ALVIESSQQSGGYVLGFKIDPVEKLQESVKEINSLHKVYSANPIFGVDY-----------------------------TDAFVAYFADGNKQQDREPVFSEELGLAIEKLKDGFTLQGLWEV | |||||||||||||
10 | 5h3zA | 0.07 | 0.05 | 0.68 | 0.67 | DEthreader | ---HESIINFQGNTL--------S-TNNLYFRLTYGIWFWDYSQDI---GVG--------VNSNELYLAQYLGHSIFQG---DYGYVICSRQNAQ-GDLFPYLQQGSIRSIAYSTPSKNKQYELA-KELTTERPHG--HILTNFVSSTQ-TTSNHDSQRIFIKI------YRQ---------LTL--P-AAYE-V-GSSFAVLKVQHKKYDFIV---------------P-DCTLSIEIFDI-VQGFDT-IASPHGLEQS--------------------------IHQEDCHGDWDDTLRLLTAHIRYFSSSKGGWRYSSG------------ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |