>PF07287 (356 residues) IANCSGFYGDRLSAAREMVEGGPIDVLTGDYLAELTMMILYKDRQKDPAAGYARTFLRQL EEVLATCVERGIKIVSNAGGLNPGGLAAAVRALANRLGVRVRVAHIEGDDLLPRLAELQA QGHELRHLDKGMPLRDLKAQVVTANAYLGGWGIAEALRRGADVVICPRVTDAALVVGPAA WYFGWARDDWDRLAAAVVAGHIIECGAQCTGGNYSFFREVPNIERIGFPIAEMHEDGSFV ITKHPGTGGLVSIGTVTAQLLYEIQGPRYLNPDVTARFDTIQLEQEAADRVRVTGVRGEP PPATTKVCINYLGGFRNSVTFVLTGLDIEEKAAIAQQTLWHLVGGKERFAEVHVDL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | IANCSGFYGDRLSAAREMVEGGPIDVLTGDYLAELTMMILYKDRQKDPAAGYARTFLRQLEEVLATCVERGIKIVSNAGGLNPGGLAAAVRALANRLGVRVRVAHIEGDDLLPRLAELQAQGHELRHLDKGMPLRDLKAQVVTANAYLGGWGIAEALRRGADVVICPRVTDAALVVGPAAWYFGWARDDWDRLAAAVVAGHIIECGAQCTGGNYSFFREVPNIERIGFPIAEMHEDGSFVITKHPGTGGLVSIGTVTAQLLYEIQGPRYLNPDVTARFDTIQLEQEAADRVRVTGVRGEPPPATTKVCINYLGGFRNSVTFVLTGLDIEEKAAIAQQTLWHLVGGKERFAEVHVDL | |||||||||||||||||||
1 | 1vlwB | 0.08 | 0.04 | 0.47 | 0.67 | DisCoVER | KIVAVLRANVAKEKALAVF---EGGVHLIEITF------------------TVPDADTVIKELSFLK-----GAIIGAGTVTSVEQCRKAVES-----GAEFIVSPHLDEISQFCKE-----------------------GVFYMPGVMPTELVKAMKLGHTILKLFPGVGPKFVPTGGV-NLD------VCEWFKAGVL-AVG-VGSALVK----------GTPDVRKAKAFVEKI---------------------------------------------------------GC------------------------------------------------------------ | |||||||||||||
2 | 7r1rA | 0.08 | 0.05 | 0.67 | 0.67 | DEthreader | CVLIECGDSSINATSSAIVKYVQRAGIGINAG--RI--RA-LGS-------FHTGCIPFYKHFQTAVKSRGGAATLFYPHLEVESLLVLKNNGVEGNRVRHMDYGVQINLMYTRLLKGED----TLFSD-----TKYEKDDIKRVA-----MM-ERASTGR--IYIQNVDCVRQSNLCLQ---------------I---A--L-PTKP-LN---------NDEN-GEIALCTLSAFAAVLDLQDYPIPARMGACPWFNETTYAKGILDTYKKDLD-WLRSIGLR------NSTLSAMQKFITAYKF-------------------------------------------------- | |||||||||||||
3 | 3gr7A | 0.10 | 0.08 | 0.87 | 0.51 | CEthreader | CDTKDGAVRTWHKIHYPARAVGQVGLIIV----EATGVTPQGRISERDLGIWSDDHIAGLRELVGLVKEHGAAIGIQLA----------------------------HAGRKSQVPGEIIAPSAVPFDDSSPTPKEMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSP--LSNRRQDEYGGSPENRYRFLGEV--------IDAVREVWDGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGAVGLITSGWQAEEILNGRADLVFLGRELLRNPYWPYAAARELGAKISAPVQYERGWRF---- | |||||||||||||
4 | 3dqqA | 0.11 | 0.08 | 0.72 | 0.62 | EigenThreader | KIGVADDFTGATDIASFLVENGMPDAVVILKTR----------------SCPAQEAIKQSLAALVWLKKQGCQVYFKYCEGNIGPVTDALMVAL---DTSFTVISPVYQGSGMRHH--------PINPMTDSYLPRLMEAQAAVLDALNERHLEIQGEVDAPLVTGG----SGLAMGLARQWAKHGVREAYAEALAQWVLSQLAPMISATASTQALAAIQQQY--GATEA----SITRFIVAG-----GETSGVVTQSL-------------------GITGFHISPGVPWVNALHALKSGNFGD---------------------ES--------FFIRAQREFQV--------- | |||||||||||||
5 | 2d73A | 0.11 | 0.09 | 0.82 | 0.41 | HHpred | ---KHSANTANVKRYIDFAAAHGFDAVLVEGGWEDWF---GNSYVFDFVTPY-PD--FDVKEIHRYAARKGIKMMMETSASNYERHMDKAYQFMADNGYNVKSGYVGHYGQWNHYLYAVADYKIMVNAHEARPICRTYPNLIGNESARGTEPFTRLVGGPMDYTPGIFETHCN--------KMNPRSTIARQLALYV----TMYSPLQMAADIPENIKDVALWDETNYLEAEPG--EYITIARKATDDGCTAGENGH-----TSKLVDFLTPGKQY---IATVYADAKDAYTIKKGI-LTNKSKLNLHAANGGGYAISI---KEVKD----------------------------- | |||||||||||||
6 | 6ktqA1 | 0.13 | 0.06 | 0.47 | 0.42 | MRFsearch | ------------RDIEVGAEIEADRIAIFYGISDTHLKAKHHT--------TRDEALRSIAETVSYAKSHGVKVRFTAEDRADYQYLLEVIKTVRDAG-ADRVSIADPSRTRELFKDLTSR---------------FPDIEFDIHAHMAVANVLAAAEGGATIIHTTLIAPLQVVAAALKYHFGIEVVDLKKLSVASLVEKYSG-------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 3ajxA | 0.18 | 0.08 | 0.44 | 0.51 | FFAS-3D | ---------DSTEAALELAGKEYVDIIELG-------TPLIKA--------EGLSVITAVKKEADIAFKAGADLVTVLGSADDSTI-AGAVKAAQAHNKGVVVDLIGIEDKATRAQEVRALGAKAKPGFDLNGLLAAGEKARVPFSVAGVATIPAVQKAGAEVAVAGGAADPAAAAKELR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
8 | 4v1xA | 0.11 | 0.09 | 0.80 | 0.56 | SPARKS-K | INENADSAIGNIEAAMAVYGEVGVRVVYARMFFDRIQGYVDALKARSPQMEETAVAKDRITALSDQYHGTAISVWPAPATTTAVEGMRWAQAFARDRAVMWTLHMAESDHDESPAEYMECYGLLDERVAHCVYFDRKRHNVKVASQVSGVAPVPEMVERGMAVGISNDSVNMIGDMKFMAHIHRLTPEKILEMATIDGARSL-------------GMDH-----EIGS----IETGKRADL--------------------------------ILLDLR-------HPQ--------TTPHHHLAATIVFQAYGNEVDTVLILSFLPFLEEAQSRATAILQRANMVANPAWRSL-- | |||||||||||||
9 | 2bb0A | 0.12 | 0.08 | 0.65 | 0.77 | CNFpred | ---------KQLRVAKKLHESQPVDLVSTFMGAHAIPPEYQ---------NDPDDFLDQMLSLLPEIKEQLASFADIFTETFTVSQSRRYLQKAAEAGFGLKIHADEID-PLGGAELAGKLAVSADHLV-DEGIKKLAGTIAVLLPGT-YARARAMIDEGVCVSLATDFNTENIQLIMSIAALHLKMTAEEIWHAVTVNAAYAIGKGE--------------------EAGQLKRSADLVIWQAP----------NYMYIPYHY------VNHVHQVMKNGTIVVNR--------------------------------------------------------------------- | |||||||||||||
10 | 3hazA | 0.08 | 0.06 | 0.70 | 0.83 | DEthreader | SFDMGEGADAYFDAYASAIETIAAPGISVKLSA-HPR-FEAISR-----ARVMVELVPQLLDLAQRAKAHDLNFTVDARLELSLDVIAATLAD-P-SLKGWDFGLIQQKRA---------------WDTEIKRA-QE-RGLDGYPVFTDYVCASLLLRPRIF-P---------Q-FATHN---TVATVL---EFQRLHGMG-----------------------------E-LYEQLRTYAPVG---SHRD---LL-YLVRRLLENGANS---SFVAQAAD----------------ALLPAIAAHLPGVEFTLDD---IADATA-VQEDVADRMIE-MVA-GA-ARELGPILHVR | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |