Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | AVLFLLGMGYGALVTRLHGKHQLAALPAEGTSGPGFNWKYLTLWGICGVLLGALLPWFDGVWEEAFGGDTAVVDGGRDETLDNANRSSTDWALGVRSIGAFVGIVFAIRRLPWASTLQLSLTLALVNPFLWYLIDRSKPGFLLSAAVGLIGSAVLMGVDPEMVPTPSASSFRNETLSDSLTFGGLASQKTMETGIWMLSVLFCSCVCFGNIGRRLA |
1 | 4xu4A | 0.15 | 0.12 | 0.78 | 1.00 | DEthreader | | VVLFLLGAVAALIGDHSHV--VTGTTVYHTDPFWSSPFWFPILVGAATASLAELRLHL---PAP---RD-----------------G-VTARQALGGVAAVVGTYVTTALVHAFPVVPVTALVCAAAAITWCVLG-DGPGAACGVVIAVIGPAVEIALVQGFAYH---------------------PDSDGLVAPFLAPLYFAFGVVAALLGELAV |
2 | 4xu4A | 0.15 | 0.12 | 0.78 | 1.00 | DEthreader | | AVLFLLGAVAALIGDHSHVV-TGTTVYHTDAVFWSSPFWFPILVGAATASLAELRLHL--PAP----RD----------------G--VTARQALGGVAAVVGTYVTTALVHAFPVVPVTALVCAAAAITWCVLG-DGPGAACGVVIAVIGPAVEIALVQGFAY---------------------HPDSDGGVAPFLAPLYFAFGVVAALLGELAV |
3 | 4xu4A | 0.15 | 0.12 | 0.79 | 3.90 | HHpred | | VVLFLLGAVAALIGDHSHVVTGTTVYHTDAVPVWSSPFWFPILVGAATASLAELRLHLPAP------------------------RDGVTARQALGGVAAVVGTYVTTALVHAFPVVPVTALVCAAAAITWCVLGDGP-GAACGVVIAVIGPAVEIAVQL--------------------GVFAYHPDGLFGVAPFLAPLYFAFGVVAALLGELAV |
4 | 4xu4A | 0.15 | 0.12 | 0.80 | 1.71 | DisCoVER | | VVLFLLGAVAALIGDHSHVVTGTTVYHTDAVPFWSSPFWFPILVGAATASLAELRLHLPA-P-----------------------RDGVTARQALGGVAAVVGTYVTTALVHAFPVVPVTALVCAAAAITWCVLG-DGPGAACGVVIAVIGPAV-------EIALVQLGVFA---YHPDSDGLFGV-----A--PFLAPLYFAFGVVAALLGELA- |
5 | 4xu4A | 0.15 | 0.12 | 0.80 | 1.97 | SPARKS-K | | VVLFLLGAVAALIGDHSHVVTGTTVYHTDAVPFWSSPFWFPILVGAATASLAELRL-------------------HLPAPRDG-----VTARQALGGVAAVVGTYVTTALVHAFPVVPVTALVCAAAAITWCVLGD-GPGAACGVVIAVIGPAVEIALVQL-------------------GVFAYHSDGLFGVAPFLAPLYFAFGVVAALLGELAV |
6 | 4xu4A | 0.16 | 0.13 | 0.81 | 1.56 | MUSTER | | VVLFLLGAVAALIGDHSHVVTGTTVYHTDAVFVWSSPFWFPILVGAATASLAELRLHLP------------------------APRDGVTARQALGGVAAVVGTYVTTALVHAFPVVPVTALVCAAAAITWCVLGDG-PGAACGVVIAVIGPAVEIALVQLGVFAYHPD-----------------SDGLFGVAPFLAPLYFAFGVVAALLGELAV |
7 | 4xu4A | 0.17 | 0.14 | 0.81 | 1.98 | FFAS-3D | | VVLFLLGAVAALIGDHSHVVTGTTVYHTDAVPVWSSPFWFPILVGAATASLAELRLHLP------------------------APRDGVTARQALGGVAAVVGT-YVTTALVHAFPVVPVTALVCAAAAITWCVLGDGPGAACGVVIAVIGPAVEIALVQLGV-----------------FAYHPDSDGLFGVAPFLAPLYFAFGVVAALLGELAV |
8 | 4xu4A | 0.12 | 0.10 | 0.79 | 1.00 | DEthreader | | IEAVVLFLLGAVAALIGDHSHVTGTTVYHTDAVFSSPFWFPILVGAATASLAELRLHLPAP-R--------------------D-G-V-TARQALGGVAAVVGTYVTTALVAFPV-VPVTALVCAAAAITWCVLG-DGPGAACGVVIAVIGPAVEIALVQLGVFA-------------------YHPDSDGLVAPFLAPLYFAFGVVAALLGEAVA |
9 | 6uz0A2 | 0.08 | 0.06 | 0.77 | 0.83 | DEthreader | | LADVMVLTVFCLSVFALIG-LQLFMGNLPDYTLALFLMQVIFLGSYL-L----M--LGSKK-PQ--KPIPRPLNKYQG-FIFDIVTKQAFDVTIMFLICLNMVTMMVETDQSPEKVNILAKINLLFVAIFTGECVKYYSWNIFDVV--L--------------------------KYF---F---S-P-TLFRVIRLARI-GRILRLIRGAKGIRT |
10 | 4av3A | 0.08 | 0.06 | 0.80 | 0.83 | DEthreader | | AFLGAMSASAGIVGMKMATRARVAGG-TIADNVGDNVGDVAGLGADLLESFVGAISS-ILA--M------------QVPKETIQALISYPIFFALVGLGCSMLGILYVIVKPSDNPQRELNISLWTSALLTVVLTAWFSAIIGIFSGILIGFWAEYY--T---SYRY--------K-------K-TDHLDAVGNTTAIGKGFA-S--FA--SL-SS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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