Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | KCNISQLAAITGLHRQTVVSRLSGVPLAPGSNEKNKLYLLTDVIRVLMEAPVSQAAEHQDPNKMTPKERKDWFDSEKGRLWLEKEMKQVVPLPEVRQQMAAIVKAITQVLEVWPDKLERDKGWSADQLNEAQDVVDEVRILLVKAIQET |
1 | 6hlkA | 0.12 | 0.09 | 0.77 | 1.07 | HHpred | | FLSQQEIADQFGVDRTTVRAWTKRGLPFIEGDGKPGRYQLGHVLFWVRGQEGLKELELIHSREILSVGEEEDKQEYEKKFNKGLEIYGYSPDEIAQARAQGIEIGRELTLKRLKK---------------------------------- |
2 | 6hlkA | 0.11 | 0.07 | 0.66 | 0.78 | DisCoVER | | FLSQQEIADQFGVDRTTVRAWTKRGLPFIEGDKGPGRYQLGHVLFWVRGQEGLKELGTGEL-HPLDCIH------------------------------------SR--EKKFNKGLEI----YGYSPDEIAQARGRAQGIE------- |
3 | 4gbyA | 0.05 | 0.05 | 0.89 | 0.83 | DEthreader | | -FISGVG------IGGIGVGA-AIG-LVVNI-DGRYASECIPALLFLMLL-YTVPEQGILRIMAT-QAVQEIKHSLDHGRKTGGRLVGVIV--IG-VMLSIFQQFVGVMAGMFSLGTAFY-TQAPIVALLSMLFYVAAFAMSGPVCWVL |
4 | 5c8dE | 0.08 | 0.08 | 1.00 | 0.70 | CEthreader | | VYTIAEVEAMTGLSAEVLRQWERRYGFPKPRRTPGGHRLYSAEDVEALKTIKRWLEEGATPKAAIRRYLAQEVRPEDLGTGLLEALLRLFRRGLRFWGPEGVLEHLLLPVLREVGEAWHRGEIGVAEEHLASTFLRARLQELLDLAGFP |
5 | 5af3A | 0.05 | 0.05 | 0.95 | 0.63 | EigenThreader | | PLYLAEASRYLVVPRATLATWADQPIITALHPTGSHARLPVGIAEAYVLNAFRRAGVPMQRIRPSLDWLIKNVGPHALASQDLCTDGAEVLWRFAERSGEQYGDANVVLDPRRDVLGPLRAGATFQAVADDYG-------VQLRDALDA |
6 | 5c8dE | 0.11 | 0.11 | 0.95 | 0.61 | HHpred | | VYTIAEVEAMTGLSAEVLRQWERRGFPPRRTPGGHRLYSAEDVEATIKREGATPARLAQ--EVRPEDLGTGLLEALLDLAGAEALFRRGLRFWGPEGVLEHLLLPV---LREVGEAWHR-GEIGVAEEHLASTFLRARLQELLDLAG-- |
7 | 6hlkA | 0.12 | 0.10 | 0.83 | 0.62 | MRFsearch | | --SQQEIADQFGVDRTTVRAWTKRGLPFIEGKGKPGRYQLGHVLFWVRGQEGLKELGT-GELHPLDCIHSREILSVG--------------EEEDKQEYEKKFNKGLEIYGYSPDEIAQARGRAQGIEIGRELTLKRLKKH-------- |
8 | 6hlkA | 0.12 | 0.09 | 0.79 | 0.90 | FFAS-3D | | -LSQQEIADQFGVDRTTVRAWTKRGLPIEGDKGKPGRYQLGHVLFWVRGQEGLKELGTGELHPLDCIHSREILEEDKQEYEKKFNKGLEI-YGYSPDEIAQARGRAQGIEIGRELTLKR------------------------------ |
9 | 5k7vA2 | 0.12 | 0.11 | 0.96 | 0.69 | SPARKS-K | | EFMARAISAIAELAKKAIEAIYRLAD-----NHTTDAAAIEAIALLATLAILAIALLASNHTTEEAKAISAIAELAKKAIEAIYRLADNHTSPTYIEKAIEAIEKIARKAIKAIEMLAKNIT-TEEYKEKAKSAIDEIREKAKEAIKRL |
10 | 3f0cA | 0.09 | 0.08 | 0.92 | 0.55 | CNFpred | | KTTMNEIASDVGMGKASLYYYFP-----------DKETLFEAVIKKEQNVFFDEMDKILNSGIDATALLKKYVKLRSLHFRHLLNLSKLR-KPVFAKAFESFKQKEVEIVAGIIQYGITTKEFRGNKHENAEFLVHLLLGVRMVKLKYK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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