>PF07277 (220 residues) LQTALHSNLKLKADNTFAFASGIHVAAIMANEFYRAASTYPIVFIEDAGKDGFMPVVLLG LTENENLFVNAEGRWEATYVPAILRRYPFALAKTGEEGQYTVCIDEESGFFTEEEGQALF NEDGQPGEVLEKVKTYLAQLQQMEQLTRQFCEVLKEHNLLAPLNMRVQKDNAVQNITGAY AVNDERLSHLSDETFLELRKKNFLPLIYSHLVSVTQIERL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | LQTALHSNLKLKADNTFAFASGIHVAAIMANEFYRAASTYPIVFIEDAGKDGFMPVVLLGLTENENLFVNAEGRWEATYVPAILRRYPFALAKTGEEGQYTVCIDEESGFFTEEEGQALFNEDGQPGEVLEKVKTYLAQLQQMEQLTRQFCEVLKEHNLLAPLNMRVQKDNAVQNITGAYAVNDERLSHLSDETFLELRKKNFLPLIYSHLVSVTQIERL | |||||||||||||||||||
1 | 4bs9A1 | 0.10 | 0.03 | 0.31 | 0.64 | DisCoVER | ------PTALQIK--------PHFHVEII--E---P--KQV----------------YLLGEQGNHAL-------TGQLYCQILP--------------------F-LNGEYTRYLTEVA----------------------------------------PELSLEVAAFWS-E---------------------------------------------- | |||||||||||||
2 | 1lnlA | 0.10 | 0.07 | 0.73 | 0.67 | DEthreader | ------GHRNLVRKVLFLAFHCVFPE-VVGGYDTWSFK-QYIYALEQED---DFEQFEIAHN---IHAMAYDPVFI-LHHSNTDRLFALQEQKFR--GHDPNFDYGHF--HY------E---------Y--DHLELGMNVQRLHDYINQQKEA--DR-VFAGFLLEGIGSTPWQFDRLYKYEIDVLESKGLD-V-------------------IT-QTSW | |||||||||||||
3 | 5hy7A4 | 0.06 | 0.05 | 0.89 | 0.67 | CEthreader | ----NMFLYSLTIQPPTTSPQLIVSLDTRHNRIVVGDVQHGMTYVVYKPDSNIPFADDTIARWTTCTTMVDYESVAGGDKFGNLWIVSICKTNLVVGGQDVLVWSGIQGTV----GVLIPFVTREDADFFQNLESHMRAEDPPLAGRDHLIYRGYYVPVKGVIDGDLRFTLLPNDKKQMIAGELDRSVREIERKISDIRTRSAF---------------- | |||||||||||||
4 | 2x4mA | 0.04 | 0.02 | 0.53 | 0.58 | EigenThreader | SSQ----LIP--NISPSTGML--SGKSH--------------EMLYDAETGRKQLDWKIKN----VAILKPYSFWTSLGSG-----NMDDYAWMNSEWTDHSSH----PATE---NWTATG-GPKGVM------------------------------RDGKGGTQTIDNSGDSVDAAGISRFGG----------------------------------- | |||||||||||||
5 | 3wsxA2 | 0.16 | 0.07 | 0.42 | 0.32 | HHpred | -------YSTVFRSTDF--FQSR--------------ENQEVIFQLR---DKYMFATKVVHQSSVQLWVSFGKPMRAAQFVTRHPINEYYIADASE-DQVFVCVSHSNNRISEAEGLKF----------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 2pffB | 0.11 | 0.07 | 0.61 | 0.40 | MRFsearch | ---------------------------------------------------QFKATHILDFGPGGASG------------------LGVLTHRNKDGTGVRVIVAGT----------------MDLYKTSKAAQDVWNRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKRIRENYSAMTEKIFKEIEKAAFEDLKSKGLIPAEYAALASLADVMSI | |||||||||||||
7 | 3q8dA | 0.12 | 0.10 | 0.80 | 0.53 | FFAS-3D | -----------------------------------------FVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTLLLRFGGRGEVKTLRSAEAVSLALPLSGIRVLEYETRFSELFFDYLHCIQSLAGEPALRRFELALLGHLGYGVNFTHCAPVDDTMTYRKGFITFTGRQLKALDADTLRAAKR--FTRMALKPLKSRELFRQF | |||||||||||||
8 | 5azaA | 0.17 | 0.15 | 0.90 | 0.59 | SPARKS-K | EVGKKFEGIKVTVEHPAATGDGPDIIFWAHDRFGGYAQSG--LLAEITPDKAFYPIAVEAL----SLIYNKDKTWEKSALMFNLQTWPLIAA------------DGGYAFKYENGKYDIKDV-GVDNAGAKAGLTFLVDLIKDYSIAEAAFNNIDTSK--VNYGVTVTFKG--QPSKPFVGINKEFLENLTDEGLEAVNKDKPLGAVALIAATMENAQKG | |||||||||||||
9 | 3zq5A | 0.11 | 0.08 | 0.75 | 0.67 | CNFpred | -----------------------DFYDVIVEEVRRMTGFDRVMLYRFDENNHGDVIAEDKR--LGLHYPESD---IPQPARRLFIHNPIRVIPDV-YGVAVPLTPA----VNPSTNRAVDLT----ESILRSA-------------YHCHLTFLKNMGVGASLTISLIKD---GHLWGLIACHHQTPKVIPFELRKACE--FFGRVVFSNISAQEDTETF | |||||||||||||
10 | 6f0kB | 0.02 | 0.02 | 0.76 | 0.67 | DEthreader | D---LGLQQAFGV-YARVIVSLDADFLGFVETRAASRRISRL----TY----TVTGGMADHRLRYV-EIARDLRAAGARGV--VL-AG-E-T----------QPPAVHALAV--D------------LHALDEPRAYDG----PT-CNACIVACDHWLRIDRYFVSDEA-HADDPQI-VVQPV-PCMHNCTYCVQRIVKTAQACAEAIT-YL-ARIT-NP | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |