Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | EKNYAKAKGSFSKENFNLINERLNNYDFKNEYDRSKFFSYAPKIRGDLRKIGIKEKSVFLDALDVVGYLIKNRFIYVDEYEFECINSLINGSPNTIFNDLIELLDSDEIDYPEKYGEKAIKKFKESYSKDKSNTVK |
1 | 3b2aA1 | 0.08 | 0.05 | 0.68 | 0.67 | DisCoVER | | ---I-SKTELR-----ELVLSWI--LDAVSLALEDKRALFLI-LELAG----E---DDETTRLRAFVALGEILKADSLRMMVLVFINALSQENEKVTIKA--LR--------------ALGYL---V--KDV---- |
2 | 5cwcA | 0.07 | 0.06 | 0.85 | 1.00 | DEthreader | | -REAELVREAADSEVLELAIRLIKEENAQISEACRAAAEAFKRVAEAAKRAGITSSEV-LELAIRLIKECVEQISEACRAAAEAFKRVAEAA--AIEEIRKRVEEAQREGNDI-EACRQA-E-------------- |
3 | 2jxuA | 0.06 | 0.06 | 0.99 | 0.54 | CEthreader | | REELTRQVGRYKNKKFMQGTVAVCARVASDGVSSEEKQKMIGFLRSSEEL-KVFDTAEVIEFFNKLVTSFDFDLEIGKGETMKYILALKDQPEAAQLALRVGIAVAKSDGNFDDDEKSAVREIARSLGFDPAEFGL |
4 | 5vj4A | 0.09 | 0.09 | 1.00 | 0.72 | EigenThreader | | DPKLIALLDDFGVSGRKAISYIQGNLTSDVIYDRLNKKIPTVSLLKTKGEALKIIEDLQNGLVKGIGYDFFHGSIGRFAQAVVYYAPRFRKGWLDYYVVRRLNRFKGEYYSNIRGTFKGFTDYRNYFIILKFDAQA |
5 | 3d5lA | 0.16 | 0.13 | 0.81 | 0.25 | HHpred | | --------TELDEKQIAAIATADQ---QAKAYSRMLYLSTESDIVKKLKEIDTPE-EFV---EPILKKLRGQQLIDDHAYAASYVRTMINLKGGIIRQHLRQ--K----GIGESDIDDAKKLALKLFRRYR----- |
6 | 4c9bB | 0.10 | 0.10 | 0.94 | 0.35 | MRFsearch | | --RGLLSRSVLQAQVYAALVAIINSK--FPQIGELILKRLILNFRKGYRR---NDKQLCLTASKFVAHLINQNV-AHEVLCLEMLTLLLERPTDDSVEVAIGFLKECGLKLSPRGINAIFERLRNILHESEIDKRV |
7 | 6ff6A2 | 0.10 | 0.09 | 0.88 | 0.69 | FFAS-3D | | -----SFYQAFFDMADVMLKVMEQLLKLDAAM-LNAIFRAAHFIKGAAGTFGFTILQETTHLMENLLDEARRGEMQLNTDIINLFLETK----DIMQEQLDAYKNSEEPD--AASFEYICNALRQLALEAK----- |
8 | 5cwjA | 0.13 | 0.12 | 0.94 | 0.63 | SPARKS-K | | RRILKEARKSGTEESLRQAIEDVAQKKSQDSEVLEEAIRVILRIAKESG-----SEEALRQAIRAVAEIAKAQDSEVLEEAIRVILRIAKESGSQAIRAVAEIAKEAQD---PRVLEEAIRVIRQIAEESGSEEAR |
9 | 1i5nA | 0.10 | 0.09 | 0.90 | 0.58 | CNFpred | | SDFYQTFFDE-ADELLADMEQHLLDLVPPDAEQLNAIFRAAHSIKGGAGTFGFTILQETTHLMENLLDEARRGEMQLNTDIINLFLETKD----IMQEQLDAYKNSEE--PDAASFEYICNALRQLALE------- |
10 | 5cwcA | 0.07 | 0.06 | 0.80 | 1.00 | DEthreader | | EEAFELVREAADSSVLELAIRLIKECENAISEACRAAAEAFKRVAEAAKRAGITSSEVLELAIRLIKECVENAEYDISEACRAAAEAFKRVAAEIRKRVEEAQREG----A---AA-------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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