>PF07267 (686 residues) MNDSNSLLITRLAAQILSRNIQTVDVIADDKTLSLEEKIDTLTSMMLAASSPPQSPAPLS TDMTASLIKNNSKMIANDFEMRYNVLRMAVVFVKRYPRYYNETTADLVADIENDLLQYQN YVNQGNYQNIEGYESLLNKAEESFIEIDSLLKKDIKKIMDDTEAFEREQEAERMRAEQIA ANALSERRVESADDVVNRADANIFTAFSNPLPGSSATRYMYESSESDTYMETARRTAEHY TDQDKDYNAAYTSNEYNSLVKTVLLRLIEKALATLKKRLHITTIDQLKKFRDHLNSDTDA GEFQIFFNHDDCVILKNLSNLASKFFNVRCVADTLEIMLEAIRNNIELVQPESDPVRRIV IKMTQEIKDSTTPLYNIAMYKSDYEAIKNENIKTLFDLYNERLPINFLDTFAISSVRDKK SAASDSLPTRSMKRARANNEQDVDEDDDDDDDDVKEVDYEKESKRRKLEDEDFLKLKALE FSKDLVNERLQKIIVVTDGMKRLYEYCNCKNSLETLPSAANYGSLLKRLNMYNLDHIEMN VNFYELLFPLTLYNDNDNNDKTLSHQLVNYIFLASSYFQNCAKNFNYMRETFNSFGPFKQ IDFMVMFVIKFNFLCDMRNFAKLIDDLVPNRQPNMRVHSVLLMRDKVVKLAFSILQFHTF SKKDKSRNTKHLQRLIMLMNANYNII |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 660 680 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | MNDSNSLLITRLAAQILSRNIQTVDVIADDKTLSLEEKIDTLTSMMLAASSPPQSPAPLSTDMTASLIKNNSKMIANDFEMRYNVLRMAVVFVKRYPRYYNETTADLVADIENDLLQYQNYVNQGNYQNIEGYESLLNKAEESFIEIDSLLKKDIKKIMDDTEAFEREQEAERMRAEQIAANALSERRVESADDVVNRADANIFTAFSNPLPGSSATRYMYESSESDTYMETARRTAEHYTDQDKDYNAAYTSNEYNSLVKTVLLRLIEKALATLKKRLHITTIDQLKKFRDHLNSDTDAGEFQIFFNHDDCVILKNLSNLASKFFNVRCVADTLEIMLEAIRNNIELVQPESDPVRRIVIKMTQEIKDSTTPLYNIAMYKSDYEAIKNENIKTLFDLYNERLPINFLDTFAISSVRDKKSAASDSLPTRSMKRARANNEQDVDEDDDDDDDDVKEVDYEKESKRRKLEDEDFLKLKALEFSKDLVNERLQKIIVVTDGMKRLYEYCNCKNSLETLPSAANYGSLLKRLNMYNLDHIEMNVNFYELLFPLTLYNDNDNNDKTLSHQLVNYIFLASSYFQNCAKNFNYMRETFNSFGPFKQIDFMVMFVIKFNFLCDMRNFAKLIDDLVPNRQPNMRVHSVLLMRDKVVKLAFSILQFHTFSKKDKSRNTKHLQRLIMLMNANYNII | |||||||||||||||||||
1 | 6gmhQ | 0.05 | 0.05 | 0.94 | 1.03 | EigenThreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGVEAMQAESCYQLARSFHVQEQYYYQATQFASSSFVLPFFGLGQMYIYRGD------KENASQCFEKVLKAYPNNYETMKILGSLYAASED-----------QEKRDIAKGHLKKVTEQYPD-----DVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDRA------KAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYRLGAMARDKGNFYEASDWFKEALQINQDHIGNLHLAKQEWGPGQKKFERILKQPSTQSDTYSMLALGNVWLQTPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKVFAQVREADVWLNLAHIYVEQKQYISAV------QMYENCLRKFYVLYLARALFKCGKLQECK------QTLLKAR----HVAPSDTVLMFNVALVLQRLATSVLKDEKSN | |||||||||||||
2 | 6vacA | 0.12 | 0.11 | 0.90 | 1.38 | FFAS-3D | ---DEAIQAVKVQSFQMKRCLD---------KNKLMDALKHASNMLGELRTSMLSPKSYYELAISDELHYLEVYLTDEFALYELVLYLLITVGVVYVKSFPQSRKDILKDLVEMCRGFRNYLLQCTRNTTGDISDSMDFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ-------------IVLTGILEQVVNCRDALAQEYLMECIIQVFPDEFNPFLRACAELHQNVNVKNIIIALIDRLALFAHREDEIKLFDIFSQQVATVIQSRQDMPS-----EDVVSLQVSLINLAMKCYPDRVVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTV-LKLKHFHPLFESMSCYVLSNV----------------LDYNTEIVSQDQVDSIMNLVST---------LIQFADEQSLVGRFIHLLRSDDPDQQLNTARKHFGAGGNQRIRFTLPPLVFAAYQLAFRYKENSQMDDKWEKKCQAHQTISALIKAELAELPLRLFLYEFMQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASLKKPDQ-GRAVSTCAHLWRVMECLKKALKIANQCDPSLQV--------QLFIEILNRYIYFY------EKTIQVLNQLIQKIREDLPNL | |||||||||||||
3 | 5vchA | 0.09 | 0.08 | 0.86 | 1.29 | CNFpred | --NTPALTALRLISNASGELSPVGVPIIEHL-SNPFERRSILLAISVLVT----GSPDYTLSQFDKIIPATVTGLKSEAVVQLAALKCIVQLSTNLQDEVARYHEQYLPLVIDIIDSAKVVIYKY---ATLALDGLLEFIHNDIIKYLDPLMNKLFQMLETQ--QSPKLRAAIVSAIGSCAFAAGSGFVPYFKTSVQYLQQFIQNV--SQIEGLSEDDIELKALTFENISTMGRAVSAAFAEYAEPLVNAAYEAIKTARLRESGYAFIANMAKVYGKDFAPFLQTIIPEIFKTLEQEE---TVNTGIAYEKEVAAAALSELAIASKFLEYVEPSLKVLAEQVNESYGLKE-TALHSMWAIVKAVLLTA-YPKGVPSGSYVDASALAVIQTVREVSLNNVIEEVETSMVIS----------------------------------------------------------VFQDLSEMLRLFGPIIIMDNDSTHLDQLCREALSVLKGEH-DASETEATLLDVALDIYVALSTNLVGGF--AQVFTTAKPVILQLQSKSKNKRSFAVGALSEIALGMRDNPFIQELLEALIISLTNDK---------SLEVRCNASYGVGLLIEYSSFDVSAI--YSPVLKSLYEILSVADEKNLATEDDEATKEI---VDRTFSNVCGCVARMILKH | |||||||||||||
4 | 2jktA | 0.07 | 0.06 | 0.83 | 0.83 | DisCoVER | ----------AVSKGDGMRGLAVFIDIRNCKEAEIKRINKELANIRSKFK---GDKALDGYSKKK-YVCKLLFIFLLGHDID-FGHMEAVNLLS-SNRYT-EKQ--IG--YL-FI--SVLVN---------SNSELIRLINNAIKNDLATFMGLALHCIAN--VG--SREMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLVGDWTSRVVHLLNDQHLGVVTAATSLITTLAQKNPEEF-KTSVSLAVSRLSR----IVTSASTDLQDYTYYFVPAPWLSV-KLLRLL---QCYPPPEDPAVRGRLTECLETILKAQPKSQHSNAK-NAV-----------------LFEAI-SLI-------IHHDSEPLVRACNQHRETNLRYLALESMCTLASSEFSH-------------EAVKTHIETVINALKTERDVSVRQR------AVDLLYAMC--DRSNAQQIVAEMLSYLETA-DYSIREEIVLKVAILAEKYA-VDYTWYVDTILNLIRIAGDYVSEEVWYRVIQIVINRDDVQGYAAKTVFEALQAPAC---HENLVKVGG-YIL---G--EF-GN-LIAGDPRSSPLIQFLLHSKFHLCVPTRA-LLLSTYIKFVNLFPEVKATIQDVLRSDSQLKNADVLQRAYLSASTDILATVLEMPP--FPE------ | |||||||||||||
5 | 1w63C | 0.05 | 0.04 | 0.81 | 0.89 | CEthreader | ------------------------------------MPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLG------------YPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLN--------------------------------------------------------------HSTQFVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPEL-MEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRN--------------DDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQ---PLVQVAAWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESVLISNMSTSVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVE | |||||||||||||
6 | 1b3uA | 0.07 | 0.05 | 0.79 | 1.03 | EigenThreader | DVQLRLNSIKKLSTIALALGVERTRSETDTIYDEDEVLLALAEQLG------TFTTLVGGPEYVHCLLPPLESLATVVRDKAVESLRAISH----------EHSPS--DLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYAVKAELRQYFRNLCS----DDT--PMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQEDLEALVTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSAD------CRENVIMSQ------------------ILPCIKELVS------DANQHVKSALAS--------VIMGLSPILGKDNTIEHLLPLFLAQLK----------DECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFSLCMAWLVDAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAGD---PVANVRFNVAKSLQKIGPIL------------------------------DNSTLQSEVKPILEKLT----------------------------------------QDQDVDVKYFAQEALTVLSLA | |||||||||||||
7 | 1vt4I | 0.16 | 0.12 | 0.74 | 0.61 | HHpred | MDETGYKDILSVFENFDCKDVQDM----PKSILSKEEIDHII---MSKDA---VSGT---LRLF-WTLLSKQEEMVQKFV--EEVLRINYKFLQRQPSMM------TRMYIEQRDRLYNDNQVFAKYNVS-RLQP--------YLKLR-------QALLELRPAKNVLIDGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCN--------------------SPET----------V-----------------L--EMLQKLLYQIDPNHSSNIKLRIH-----SIQELRRLLKSKPYENCLLVLLNVQNA-------KAWNAFNLSCKILLT--------------TRFKQVTD---FLSAA------TTTH--ISLDH-HSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAES-------IRDLATWDWKHVNCDK--------LTTIIESSLNVLEPAEYRKLSVF--PPSAHIPTILLSFDVIDVMVKLHKYSLVEPKESTSIPSIYLELKVKLENEYAL--HRSIVDHYNIPKTFDSDDLIPPYLDQFYSHIGH--------------HLKNIEHPERMT------LF-RMVFLDFRFL---EQ---KIRHDSTAWNASGSILNTLQQYERLVNAILDFLP-KINLICS--KYTD-LLRIA-LMAEDEAI- | |||||||||||||
8 | 1w63C | 0.08 | 0.06 | 0.73 | 0.78 | MRFsearch | --IRLRELIRTIRREMIQKECAAIRSSFRE--EDNTYRCRNVAKLLYMHMLG--------YPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSGISDPFL----QVRILRLLRILGRNDDDSSEAMNDILAQVATNETSKNVGNAILYETVLTIMDIKSGLRVLAINILGRFLLN---------NDKNIRYVALTSLLKTVQT---------DHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNG---------------NNIRGMMKELLYFLDSC-----------------------------------------------------------------EPEFKADCASGIFLAAEKYAPSKRWHI------DTIMRVLTT-------AGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDY---SQQPLVQVAAWCIGEYGDLLVSEDEVLDILESVLISN--------MSTSVTRGYALTAIMKLSTR--------------------------------------------FTCTVNRIKKVVSIY---- | |||||||||||||
9 | 4iggA | 0.11 | 0.09 | 0.84 | 1.33 | FFAS-3D | -VKRGNMVLLSAVTRLLILDMADVYKLL--------VQLKVVEDGILKLRNAGN-----EQDLGIQYKALKPEVDKKDVGHRDQMLQKNVPILYTASQACLQHPDLIYKQLQQAVTGISNAAQATASDDEERLESIISGAAAECNAVRQALQDLLSEYMGNAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVDHVSDSFLETNVPLLVLIEAAKNGNEKEVKEYAQVFREHANKLIEVAISNNEEGVKLVRMSA--SQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWE-----------------KQVRVLTDAVDDITSID---DFLAVSENHILEDVNKCEKDVDGLDRTAGAIRGRAAR------VIHVVTSEMDNYEPEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGMIRTPGQSARAIMAQLPQEQKAKIAEQVASFQEEKSKLDAEDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVISAAKKIAEAGS----------RMDKLGRTIA----DHCPDSACKQDLLAYLQRIALY----CHQLNICSKVKAGELVVSGVDS-AMSLIQANLMNAVVQTVKASKSQGMASLNLPAV------------------------------------------------- | |||||||||||||
10 | 7abhu | 0.08 | 0.08 | 0.94 | 0.99 | SPARKS-K | LEDQERHLLVKVIDRILYKLLVVIEPLLIDEDYARVEGREIISNLAKAAGSTMRPDIDNMDEYVRNTTARAFAVVAKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGALAIAALAEAATPYGIESFDSVLKPLWKGIRKGLAAFLKAIGYLIEYANYYTREVMLILIREFQKKIVLKVVKQCCGTDGVEANYIKTELPPFFKHFWQHRMALDRRNYRQLVDTTVELANKVG-AAEIISRIVDDLKDE--AEQYRKMVMETIEKIMGNLAADIDHKLEEQLIDGILYAFQEQTTED------SVMLNGFGTVVNALGKRVK-----PYLPQICGTVLWRLNNKSAKVRQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYEYPEVLGSILGALKAIVNVIGMHKMTPPDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGP-----HDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVPALMNEY--------------RVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL------VHRQTASAVVQHMSLGVYGFGCEDSLNHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARKVRDVYWKIYNSIYIGS | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |