Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | MSKISKASSLCLLLLVFFLFSSQPALSLRGPKLQSSEPKSAQTLMNNSSSMNKINSGNAKSMIAGFFSHKFPLKGWPFPKYPPFTMVNPNIATNPSGAQEESAKLPSSPSKDNKDGRNA |
1 | 1lxlA | 0.11 | 0.10 | 0.90 | 0.67 | DisCoVER | | --MSQSNRELVVDFLSYKLYAVKQALREAGFEFLTQLITYQSFEQVVNELFRGVNWRIVAFFSFGG--ALC-V--ESVDKEMQVLVSRI-AAWMATYL---NDHLEWIWDTFVELYGN- |
2 | 2nz2A | 0.04 | 0.03 | 0.81 | 0.83 | DEthreader | | DSREFVEFIWPAIQS-S-AL----YEDRYLLGMH----PDILEIEFVKTSLLFMNTPAGTILYHAHLDIEAMDR-----------AELVYTFCVRHCIAKSQ-ERV-EGKRESPSLYNE |
3 | 11asA | 0.04 | 0.04 | 0.98 | 0.43 | CEthreader | | LKSTVEAIWAGIKATEAAVSEEFGLAPFLPDQIHFVHSQELLSRYPDLDAKGRERA--IAKDLGAVFLVGIGGKLSDGHRHDVRAPDYDDWSTPSELGHAGLNGDILVWNPVLEDAFEL |
4 | 4di0A | 0.11 | 0.10 | 0.95 | 0.52 | EigenThreader | | KGS----KTEENLKYAFAGESQANRRYLYFASKADVEGQNDIAALFRSTAEGETGH--AHGHLEYLEAVGDPATGLPFGTSRQNLQSAIAGETHEYTDMYPGMAKTARDEGFEEIANWF |
5 | 4ep7A2 | 0.21 | 0.16 | 0.77 | 0.28 | HHpred | | -PYFGTLSSYGYVLMVLYYLIKPPVF----PNLLLSPLK-QEKIVDGFDKLESQNYSSLGSLLHGFFRFKFEPREKVLTKQEILAIEDPFEISNVGRT--------------------- |
6 | 1ocoG | 0.16 | 0.08 | 0.48 | 0.38 | MRFsearch | | --RTWRFLTFGLALPSVALCT-----------------------------------------LNSWLHSGPAFIPYHHLRTKPFSWGNPRVNPLPTGYEK------------------- |
7 | 7d3uC | 0.11 | 0.10 | 0.90 | 0.45 | FFAS-3D | | MVRVILGFILLSHAAHLTLMAAGGASRREAPLVSDPDPALTSDGLPQAFVLTAIVIAFAITIYLLVLAVIG----GDDDDTDIGDLDPLDLLPETPGGAHPEDPEPDEPST-------- |
8 | 1pp1X3 | 0.09 | 0.08 | 0.82 | 0.81 | SPARKS-K | | -TELEISSIFSHCCSLLIGVVIGSSIKAGAEQIKKRFKTAA---LNRPSHGETATLFNPHEAIDWING-----QPWVGSFVLSLLTTDFE---SPGKEFDQIKLVASYAQ--------- |
9 | 3hc1A | 0.11 | 0.04 | 0.39 | 0.47 | CNFpred | | YLGLDLLREAIFTCAIVDLFKTGKGPLNRSTL-------------------------WAHSLGVARIAKLI------------------------------------------------ |
10 | 1nneA | 0.06 | 0.05 | 0.82 | 0.83 | DEthreader | | ADLLKDLARLEALVPGLIREDLRAAHEGYFELRERTRVPKYRYTLMKEKEREVYRLEALIRRREEEVFLEVRR--AK----------------R--QA-EALREAARILAELDVYAALA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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