>PF07259 (188 residues) MARSPLLCGPQAGGVGLSVLLLLGLLRPVPALGTRPVKEPRGLGAPSPPMAETGASRRFR RAVPGGEAAGAVQELARALAHLLEAERQERARAEAQQAEDQQARILAQLLRLWGSPRPSD LSLGQDDDPDAPATQLARALLLTRLDPAALAAQLLPVPASVLRTRPSAYDDRPTGQGAED AGDWTPDV |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MARSPLLCGPQAGGVGLSVLLLLGLLRPVPALGTRPVKEPRGLGAPSPPMAETGASRRFRRAVPGGEAAGAVQELARALAHLLEAERQERARAEAQQAEDQQARILAQLLRLWGSPRPSDLSLGQDDDPDAPATQLARALLLTRLDPAALAAQLLPVPASVLRTRPSAYDDRPTGQGAEDAGDWTPDV | |||||||||||||||||||
1 | 4x9mA2 | 0.06 | 0.03 | 0.56 | 0.91 | DisCoVER | ---------------ME--TR--DV-LIVG-GGVIGCATAYLSQKVTLVEKHYLAQETSHSKLALAAQNKVQI-------------------------------------CTTEVTNISKQVDGTYLVWTNNETT------------------PS-F---KV-KKIIDAAGLLAFVILGGMIVRAVL- | |||||||||||||
2 | 1r5zA | 0.13 | 0.11 | 0.83 | 0.83 | DEthreader | PR----E-VRLLLLRNDLHNLQALLRAKGRP-F-EEV---L-L-LPGTLREEVQAVLAALRL-TQDLARVEALLAKRFFEDVAKAAKG-LDQPALRDYLALEVDAENLRTAFKLQGSEGDYLLSGVRD---L-KALERGLRCVLLK-AK--VL--YVKEREWEAVRLRL-L--------ARRAYVEVV | |||||||||||||
3 | 1js4A1 | 0.06 | 0.06 | 0.95 | 0.43 | CEthreader | TDLRSYRWTIAWDDKSYGTYVLLAKETGKQKYIDDANRWLDYWTVGVNGQRVPYSPGGMAVLDTWGALRYAANTAFVALVYAKVI---------DDPVRKQRYHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAHGSWTDSIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVAT | |||||||||||||
4 | 6yvuB | 0.06 | 0.06 | 1.00 | 0.58 | EigenThreader | KAEKESDDGLLEYLEDIIGQFKLLQSNSKLASTLEKISSSNKDLEDEKMKFQESLKKVDEIKAQRKEIKDRISSCSSKEKTLVLERRELEGTRVSLEERTKNLVSKMEKAEKTLKSTKHSISEAENMLEELRGQQTEHETEIKDLTQLLEKERSILDDIKLSLKDKTKNISAEIIRHEKELEPWDLQL | |||||||||||||
5 | 6oxcB | 0.26 | 0.17 | 0.65 | 0.33 | HHpred | ----------DAGADYPACDVMLALVTLSIDLGADPLTASLRDR-PAPPIEEAGER-GLRAITVDGNLATAATELAATVAAAVAYLRVLTESGL--VVSD----ALRQI---------SF-RLAADDDQFMTLAKMLRQL-WARVA-EVVGDP----------------------------------- | |||||||||||||
6 | 1o7xC2 | 0.13 | 0.09 | 0.65 | 0.38 | MRFsearch | -----------KKELNDLKAKLNEEYEVPQEVLD-----------------------TIYLMPKEADAIGLLEVGTAALASIDKFKWKENDKEKAISIIAKMATLVANVYRRKEGNKPRIPEPSDSFAPTTDEINAMDKALILYVPASTTAALVAA-------------------------------- | |||||||||||||
7 | 6xz4A2 | 0.15 | 0.10 | 0.66 | 0.60 | FFAS-3D | ---------------LVADLLLLSS-------EARPVL-------FEGPASSGAGAESFEQCR--DTIIARTKGLSILTHDVQSQLNMGDSLVELGDLVVSLTECSAHAAYLAAVATPGAQPAQRAAAVSAEGKAVQTAILGGAMSVVSACVLLT--------------------------------- | |||||||||||||
8 | 7cunD | 0.13 | 0.12 | 0.94 | 0.59 | SPARKS-K | LQRLGELQSELAGVADFSATYLRCQLLLIKALQEKLWNVAAPLYLKQSDLASAEETYKMEFMYSGENKQVVIIHHMRLQAKALQLIVTARTLDPLFGMCEKFLQEVDFFQRYFIA--------DLPHLQDSFVDKLLDLMPRLMSKPAEVVKILQTSAFLHLPLPEQIHK---ASATIIEPAGESDNP | |||||||||||||
9 | 2qibA | 0.14 | 0.09 | 0.59 | 0.45 | CNFpred | --------------LSLYEAALQRASDDLADRFVEP--------RQGPLGAR---LLRVMGR-----YFDFVDEHGPGFSALMRGGPAVGSTTTNALVDSVRQAAYVQILSHLDVTEP-----------PARLELVVRSWISLA---ESTALLWL--------------------------------- | |||||||||||||
10 | 5aj3d | 0.13 | 0.09 | 0.71 | 0.83 | DEthreader | -----------------------------------RK-----PAKSK-GRVATP--PAVDPFFVLTERYRQYRQTVRALRLEFMSEVRKKLHEARAQAERKAQEDAAEHRELMAWNQAEQRLEL---RLRQEALEQERRQAEEAVLQAREAQAWAQLQVLQLQEEAFITRENLE-RVEEA-------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |