Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | KPGRENGTLLLALIAGLSINGSFAALFSSVVPFSIFPLIALVLAVYCLHQRYLNRAMPDGMPKLAAACFLLGVLLYSAIVRAEYPQIGSNFLPSVLCVALVLWIGMKLKARK |
1 | 4an8A | 0.08 | 0.07 | 0.92 | 1.17 | DEthreader | | LEENEKALKMAEELGQGLK-HLAQEVAKVVLKLANSPLERLYWHALDGAFPRFFARASLDLWREALRGAALEAWKATRRFLGTGARHLKLAQGEQEFGRLLGEL-------- |
2 | 6tejA | 0.10 | 0.10 | 1.00 | 1.17 | DEthreader | | LLAPLKKPLIVSGVLQALITLIELAPFVLETAVLGLGAVLAAAMTLWLHRVDARFALDTALHYLIHAIPDAVAAVVAPVAVLLPFLLTTFGARLLGIGYGLSGIQTGMLAAR |
3 | 4ryiA | 0.07 | 0.06 | 0.96 | 0.51 | DisCoVER | | SVLFPIDEKPSWTIGMIWAVLFGLIALSVAIIFW-FLFLLNYIFNQAFSYFQF--SQKNLFLATVDCLLVAITTLLLIMFSSNLSKV-SAWLLIPYFLWSAFATYLSWTIY- |
4 | 4an8A2 | 0.08 | 0.07 | 0.92 | 1.17 | DEthreader | | LEENEKALKMAEELGQGLK-HLAQEVAKVVLKLANSPLERLYWHALDGAFPRFFARASLDLWREALRGAALEAWKATRRFLGTGARHLKLAQGEQEFGRLLGEL-------- |
5 | 3m71A1 | 0.09 | 0.09 | 1.00 | 0.43 | CEthreader | | EYHSPVRFSFIALIPITTMLVGDILYRWNPLIAEVLIWIGTIGQLLFSTLRVSELVFEQKSTHPSFYLPAVAANFTSASSLALLGYHDLGYLFFGAGMIAWIIFEPVLLQHL |
6 | 5cwqA | 0.08 | 0.08 | 1.00 | 0.72 | EigenThreader | | RGDLKELAEALIEEARAVQELARVACERGNSEEAERASEKAQRVLEEARKVSEEAREQDDEVLALALIAIALAVLALAEVACCRGNSEEAERASEKAQRVLEEARKVSEEAR |
7 | 6snhX2 | 0.15 | 0.14 | 0.97 | 0.25 | HHpred | | -QVHEKTILIPLLPITLLYVLSLVSWINNVALFTLWPLLKQYAVSFLLSNWLIGNFSLLYNVVSFIIGTYIAYHFLDQFVASKYPDLWVLLNCAVGFICFSFWLWYKIFT-- |
8 | 5xpdA1 | 0.18 | 0.17 | 0.96 | 0.20 | MRFsearch | | ----TAFLLITINAFGCVIETIYIVLFVSYSTLKVLGLLNFLGFAAIVLVCELLTKGSTREKVLGGICVGFSVSMFAAVVRTRSVEFMPFSLSLFLTINAVTWLFYGLAIK- |
9 | 5wb1A1 | 0.11 | 0.10 | 0.88 | 0.63 | FFAS-3D | | -------LYGVVFLFGSIGNFLVIFTITWRRRICSGDVYFINLAAADLWMQYLLDHNSLASVAMFASLCFITEIALDRYYAIVYMRYRPVKQACLFSIFW--WIFAVI---- |
10 | 6w2wA2 | 0.18 | 0.17 | 0.96 | 0.91 | SPARKS-K | | --ENEAAKECLKAVRAALEAALLALLLLAKHPGSVQLATAALRAVEAACQLAKQYPNSDIAKKCIKAASEAAEEASKAAEEAQRPD--SQKARDEIKEASQKAEEVKERCER |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|