Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | YNELIEKLVSMGYRGDHVVNVIQSLEESGQPVDFNAILDRLNGHS |
1 | 5hfgA | 0.12 | 0.11 | 0.96 | 1.17 | DEthreader | | PTAAVLAAEALDGLGAAMLARIQRAHYVGRRIVLLELGAELGL-- |
2 | 4wj3B | 0.16 | 0.16 | 0.98 | 1.17 | DEthreader | | MADYFEKVQGICGDAKLAANWVMVLG-SLLPVSAEQLGGMILRIK |
3 | 2ztdA2 | 0.11 | 0.11 | 1.00 | 1.23 | SPARKS-K | | RSPVVEALVGLGFAAKQAEEATDTVLAANHDATTSSALRSALSLL |
4 | 3a5iA | 0.22 | 0.22 | 1.00 | 1.17 | DEthreader | | FEQLLDSTEDLVVTLTTLHKVLQNLLAEKVPIDMRTILETLAEHL |
5 | 4oj7A | 0.04 | 0.04 | 1.00 | 1.17 | DEthreader | | LTDVEKRATANGVDPAYARTFFDDQIAASKLDLTQSLIAALARVA |
6 | 3mixA2 | 0.12 | 0.11 | 0.93 | 1.17 | DEthreader | | IEQL--ID-KVTLSVGDIQKVLAKLLKEKVSINLVTIFETLADYK |
7 | 1vg5A | 0.28 | 0.24 | 0.89 | 0.49 | HHpred | | SEEQIQKLVAMGFDRTQVEVALAAA--DD---DLTVAVEILMSQS |
8 | 2lbcA2 | 0.17 | 0.13 | 0.80 | 0.51 | DisCoVER | | PEEIVAIITSMGFQRNQAIQALRATN-----NNLERALDWI---- |
9 | 1ixrB | 0.12 | 0.11 | 0.91 | 0.48 | MRFsearch | | --EAVMALAALGFKEAQARAVVLDLLAQNPKARAQDLIKEALK-- |
10 | 1ixrB2 | 0.11 | 0.11 | 1.00 | 1.04 | SPARKS-K | | AEEAVMALAALGFKEAQARAVVLDLLAQNPKARAQDLIKEALKRL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|