Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | VIAATEEWLEKAVIGLNLCPFAKSVHVKKQVRYVVSEATTPEELLEQLMDELQLLADTEPEKVDTTLLIHPHVLTDFEDYNEFLDVADAALEDMELVGELQVASFHPDYQFADTEKDDIGNYTNRAPYPTLHLLREDSIDRAVEAFPDAEDIFEKNIETMEKLGHEGWA |
1 | 2pfzA2 | 0.08 | 0.06 | 0.79 | 0.49 | DisCoVER | | TA--YANLHVENLTQFVDVLSKLKIT----LHNNASL--------YKAPEIKRAVQ---GNQAQIGEILLTELDGGYDASFKLYQAQKPFLEKLSQ-GMMLLYSVAWPPEAW--------------LPKNAVLVNKKAFDALDPATQQA--LKKAGAQAEERG-WKLS- |
2 | 2an0A | 0.08 | 0.07 | 0.80 | 1.00 | DEthreader | | HKEELEHGAKMAWR-NSNCIGRLFWN--S-LNVIDRDVRTKEDVRDALFHHIETATNNGK--IRPSITIFPPEEEKQ-VEIW-NHQLIPLELPRVIEYGVPIISD------------------MKLEYNAPFNGWYMGEIVDHTAAS-WTWLIPI--YD-NSI---VKP |
3 | 6wgmA1 | 0.08 | 0.07 | 0.79 | 0.54 | CEthreader | | -----------------------FQSMKWDMPMAYAATNFHSEHGVIFADKVKAYTGGKTGQAPIGERFMSFLATSYEDNDKLWAAAKDKVNAQLADLNLVALYTCPWPGQ-----------VNAWLPRNYVIINKGIYEGLSDDIRSALHKAADETGAACAAKSAE-- |
4 | 2frxA | 0.06 | 0.05 | 0.83 | 0.63 | EigenThreader | | LPVAALFKTTQISARNNNISRCGVFGAAVPAILLDAPCSGAATQRELIDSAFHAL--RPG---GTLVYSTCTLNQE-----ENEAVCLWLKETY--PDAVEFL-----PLGDLFPGANKALTEEPQIEGFFVARLRKT--------QKDREAGQI----RQAATGVGLN |
5 | 4rr6A | 0.15 | 0.08 | 0.50 | 0.26 | HHpred | | ---------------------PGEASFGELVVFTTVEDGDGPQTVMYAASDIASHSSRL---KVTTVILYPYLLAKPMAAHKRLIELEGALRTFPG--HVHRAPFHPLAEL---------------------------------------------------------- |
6 | 6wgmA1 | 0.09 | 0.07 | 0.75 | 0.35 | MRFsearch | | --EHGVIFADKVKA-----------YTGGKLEITTHPGGKGGEIKRAVQ----------TGQAPIGERFMSFLATSYEDNDKLWAAAKDKVNAQLADLNLVALYTC-----------PWPGQVNAWLPRNYVIINKGIIRSALHK--AADETGAACAAKSAE------- |
7 | 5awhA2 | 0.11 | 0.09 | 0.78 | 0.63 | FFAS-3D | | -QGKVENFLSAFRDGMGFSKGFVDLMGLTKVEFVMCSSADRNGAHTKYNSAIEDKLAGAGE-VHAGIVVLFEDHARLPDDRNPYIHTKSLLLTLGVP---------------------------------TQQVRMPTVLLEPKSL--QYTLQNFSIATYAKLNGTPWT |
8 | 5cwjA | 0.16 | 0.11 | 0.72 | 0.54 | SPARKS-K | | EQERIRRILKEARKSGTVAQLAKKSQDSEVLEEAIKESGS-EEALRQAIRAVAEIAKE---------------AQDSEVLEEAIRVILRIAKESGSE--------------------------------EALRQAIRAVAEIAKEAQDLEEAIRVIRQIAEESGSEEAR |
9 | 5i2uA | 0.12 | 0.10 | 0.85 | 0.62 | CNFpred | | NPEFALQCITPVIE---------SAIENGIYVIIDFHAKYTEEAKTFFAGMAEKYGE----YPNVIYEIWNEPDFEWEEVKTYSEEVIAVIRAIDPDNIILVGSPHWDQDLHLVAEDPIRDVS--NIMYTMHFYAAT-----------HEAWLRDRTDEAIAKGIPVFV |
10 | 1vagA | 0.09 | 0.07 | 0.81 | 1.00 | DEthreader | | LDTELIYGAKHAWRNASRCVGRIQWS--K-LQVFDADCTTAHGMFNYICNHVKYATNKGN--LRSAITIFPQRHDF--RVWNSLPLLFQIPPELVLEYGLPAVSNML-----------------LEEFACPFSGWYMGEIVDHHSTE---DWVWIV--ML-NYR--LTP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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