Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MQAALSIAPPVFPVKPSKNLSQVILSPPQLGASSLAPRASPIKAAYATVAYDTSTVDYSSVISVFPAEACETLGGDACLANIFPEVKLEARNDAAAARIASEPIEREYLEYNDAKTVFCAEACDDLGGEFCSR |
1 | 2ys4A | 0.04 | 0.03 | 0.68 | 0.70 | DisCoVER | | --ARAILDFPDKLNFS------TCP-VK-------YSTQKILLVRNIGNKNAVFHIKTRPFSIEPAIGTLNVGESMQLEVEFERLIVCY-----------D----TGEK----VFVSLYGAAIDM-------- |
2 | 1t9sA | 0.07 | 0.05 | 0.75 | 0.67 | DEthreader | | -----AYHNWRFNAQFLQILALLI-------------ALSHDLD--HPGVSNQDLYMTACDLSAITKWPIQQRIA--LV--------EFFDGDRIEPNREKKKIPSMQVGFDAICLLYPLLDGCRNRQKW--- |
3 | 2qj6A | 0.05 | 0.05 | 1.00 | 0.51 | CEthreader | | SGKHFYFNTDGIMQIGVFKGPDGFEYFAPANTDANNIEGQAIRYQNRFLYLHDNIYYFGNNSKAATGWVTIDGNRYYFEPNTAMGANGYKTIDNKNFYFRNGLPQIGVFKGSNGFEYFAPANTDANNIEGQAI |
4 | 1qs0A | 0.09 | 0.08 | 0.97 | 0.53 | EigenThreader | | LARDVSLVEIEAGFFLATQFVQAVGWAASAIKGDTKIRAPVILNVVNNQGESTTFAGVGCGIASLRFVAVYAASRWAAERAGPSLIEWYRAGPHSTSDDPSKYRPAHFPLGDPIARL----KQHLIKIGHWSE |
5 | 1qolC | 0.28 | 0.16 | 0.57 | 0.30 | HHpred | | -------------------------------------------------------LHTGIGTASRPSEVCVVDGTDMCLADFHAGIFLKGQEHAVFACVTSNGIDDEYPWTPDPSDVFVPYDQEPLNGEWK-- |
6 | 2pffB | 0.12 | 0.01 | 0.06 | 0.93 | MRFsearch | | --VRVIVAGT--------------------------------------------------------------------------------------------------------------------------- |
7 | 2ao7A2 | 0.15 | 0.09 | 0.61 | 0.26 | FFAS-3D | | ----------------------------------------------FTDCNRHTQVCINGQCA---GSICEKHGLEECTCKELCHVCCMKKMEPSTCASTGSVQWNKYFLGRTITL-QPGSPCNDFRG-YCD- |
8 | 6f1tg2 | 0.07 | 0.05 | 0.76 | 0.88 | SPARKS-K | | ---------VVSCLDWSSQYPELLVASYNNNEDAPHEPDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLNRSNKRTPVQRTPLSAAAHTHP----------------------- |
9 | 4kitB | 0.17 | 0.04 | 0.22 | 0.47 | CNFpred | | ------------------------------------------------------------QIIVCTPEKWDIITRKGGERTYTQLVRLI-------------------------------------------- |
10 | 5xjcQ | 0.06 | 0.06 | 0.95 | 0.83 | DEthreader | | ---TDGLQKFILLLLKYFFLTHDYLCVVP-EQRTLIRHLYVRRLEKRQK--GVPGASYTCEAGFFLMSRWEEFFPFYECFHIIFLEFARKYLLVLVFKYIMEEAAGDHHD-ACNLYNVRRLVAMSRARLYIAF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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