Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | MFSMSSGSCNGATSIFGNVHCQAAQNTAGGDLQATSSLIAYWPYLAHGGGLIIIIIIVICLVCCCRAKVKRDATRSVFYRELLTLNSGKCNAAPPSYDV |
1 | 1g8xA | 0.04 | 0.04 | 0.95 | 1.00 | DEthreader | | SSGLVAVN----HIFAIVHFVRCILLR-VLEGIITGFPNRFRGQLARIEEAREQRLGSEQTKSDYLKRANELVQWINDKQASLESRDFVFAEYKKKEKA |
2 | 6j9rA | 0.03 | 0.03 | 0.87 | 1.17 | DEthreader | | LQTL---------D--GK-IGEIVGAGSDQNLTKVKLQYQKAHNELNETHQFFAS-LDERKTELLKELETLYTAKVNSNNSWQQRSRDLIDKATARSPA |
3 | 6jxrn | 0.12 | 0.07 | 0.60 | 0.80 | DisCoVER | | VHEYMSWYLIHYSVGAGITDQGCASRRRGEQYFGP-----------------------------------DLKNVFPPEVAVFE----VCLATGFYPD- |
4 | 5e84A | 0.02 | 0.02 | 0.88 | 1.00 | DEthreader | | -DAQRNCPLTPREGEDNHLL-FEIDVN---LRVINDQN-RLTPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGD-KEKL-----QIS |
5 | 4h63Q | 0.05 | 0.05 | 1.00 | 0.46 | CEthreader | | QGVNFTGDEILVPISDDHVVRITLETSSTNFVTIKQEKELLKCLCDTLNAIAHILFLKHCRKSDRRLRPLIFYYNLNQESLEFQRWLKQRDISFKFMPN |
6 | 6m17A | 0.06 | 0.06 | 1.00 | 0.48 | EigenThreader | | RLRRGSLGVWSSIHPALKGLGLASMLTSFMVGLYYNTIISWIMWYLFNLDAGAQVFFSFSVIVSIINGFTSVYVAIVVYSVIGFRATQRYDDCFSTNIL |
7 | 2kncB | 0.12 | 0.08 | 0.67 | 0.39 | HHpred | | ------------------------------MGSKG---PDILVVLLSVMGAILLIGLAALLIWKLLITIHDRKEFAKFEEERARAKWDANNPLEATSTF |
8 | 6agfB | 0.12 | 0.07 | 0.58 | 0.43 | MRFsearch | | ------------TSVVKKIHIEVVDK------ANRDMASIVSEIMMYVLIVVLTIWLVAEMIYCYKKIAAATETA------------------------ |
9 | 3j0fI2 | 0.17 | 0.11 | 0.66 | 0.41 | FFAS-3D | | -------------------------DPHGWPHEIVQHYYHRHPVYTILAVASATVAMMIGVTVAVLCACKA-------RRECLTPYALAPNAVIPTS-- |
10 | 3hstB | 0.13 | 0.13 | 1.00 | 0.69 | SPARKS-K | | IEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQATNNVAEYRGLIAGLDDAVKLMDSKLVVEQMSGRWKKHPDLLKLYVQAQALASQFRRINYEWVPR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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