>PF07182 (298 residues) AYADAAAMVPPGNRNAEQPAIPGASVRRTKGTNSTFERKYQKVHELLATDTKLMSKIKST ARAYGIDPIHIIGALVGEHTYNVDAYDGLQSYYVKAASYAGQSFRFAYDGEDVDDFVARP QFDACKGKRDSYSLWTCREDVWESDFRGKKVGGKSFPDNRFSAVFFQPFYAGQTFGLGQV NPLTALELSDLVSSTSGIPKLDEKDAGSVYKAIMDPDLSLAFVAASIRKSIDDYRSIAGM DISGNPGITATLYNVGNSRQRAAALAAKNRGAGQPVWPEENYYGWLINDKLDDLKSLL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | AYADAAAMVPPGNRNAEQPAIPGASVRRTKGTNSTFERKYQKVHELLATDTKLMSKIKSTARAYGIDPIHIIGALVGEHTYNVDAYDGLQSYYVKAASYAGQSFRFAYDGEDVDDFVARPQFDACKGKRDSYSLWTCREDVWESDFRGKKVGGKSFPDNRFSAVFFQPFYAGQTFGLGQVNPLTALELSDLVSSTSGIPKLDEKDAGSVYKAIMDPDLSLAFVAASIRKSIDDYRSIAGMDISGNPGITATLYNVGNSRQRAAALAAKNRGAGQPVWPEENYYGWLINDKLDDLKSLL | |||||||||||||||||||
1 | 4luqA2 | 0.15 | 0.11 | 0.71 | 2.85 | HHpred | -----------GVNPTDLPSIAFGDLKLLNYSQLSPQDKLNQAQTLVGQPPSRAKVMSAAARKYDLTPQLIGAIILAEQRDQTR-DEDAKDYQAAV-S-----I----------------------------------------------------------------KSANTSIGLGQVVVSTAIKYE-LFTDLLGQPVRRGLSRKAVATLLASDEFNIFATARYIRYVANLASQQ---DLRKLPKTRGAFIDLRAYAGNPRNWPRDNVRSRPWDDNLSPGWPMFVDDAYATFLDPG | |||||||||||||
2 | 4luqA2 | 0.12 | 0.08 | 0.67 | 1.12 | DisCoVER | AGATGVASQAIQG------PFSGVGATGVNPK-YSN-PLLNQAQTLVGNPPSRAKVMSAAARKYDLTPQLIGAIILAEQRDQTRDE---------------------------------------------DAKD---------------YQA--AVSIKSANTSI--------GLGQ-VVVSTAIKYE-LFT-DLLGPVRRGLSRKAVATLLASDEFNIFATARYIRYVANLASQLPKTGNPRNVRALASEYTS-RP---W--DD----------NL-SPGWPMFVDDAYATFLMF- | |||||||||||||
3 | 4luqA2 | 0.15 | 0.11 | 0.73 | 4.71 | HHsearch | --AGATGVASQGVNPTDLPSIAFGDLKLLNKSNLSPQDKLNQAQTLVGQPPSRAKVMSAAARKYDLTPQLIGAIILAEQRDQTR-DEDAKDYQAAV-S-----------------------------------------------IKSA----------------------NTSIGLGQVVVSTAIKYELF-TDLL-GQPRRGLSRKAVATLLASDEFNIFATARYIRYVANLASQ-Q--DLRKLPKTRGAFIDLRAYAGNVRALASEYT-SRPWDDNLSPGWPMFVDDAYATFLDPG | |||||||||||||
4 | 4luqA | 0.17 | 0.13 | 0.74 | 1.18 | HHsearch | AAAGATGVAS-QAVNTDLPSIAFGDLKLLNKDNLSPQDKLNQAQTLVGQPPSRAKVMSAAARKYDLTPQLIGAIILAEQ-RDQTRDEDAKDYQAAV-S-----------------------------------------------IKSA----------------------NTSIGLGQVVVSTAIK-YELFTDLLGQPVRRGLSRKAVATLLASDEFNIFATARYIRYVANLA---SQQDLRKLPKTRGAFPSIDLPRDNVRALASEYT-SRPWDDNLSPGWPMFVDDAYATFLDPG | |||||||||||||
5 | 4luqA2 | 0.11 | 0.07 | 0.64 | 0.83 | DEthreader | -------------------GDLGAYLSQLS--PQDKLNQAQTLVGQPINPPSRAKVMSAAARKYDLTPQLIGAIILAEQRDQ-----TRDEDAKDYQAAV---SIK------S--------------------------------------------------ANT-----SI-GLGQ-VVVSTAIKY-ELFTDLLGQVRRGL-SRKAVATLLASDEFNIFATARYIRYVANLASQQLLRAYPWPRVRALASEYTSRPWDD--NL------------PGWPMFVDDAYATFLDPGMRF | |||||||||||||
6 | 4luqA | 0.12 | 0.07 | 0.64 | 0.83 | DEthreader | --------------GDLGA-----YLSQLSP-QD-KLNQAQTLVGQPINPPSRAKVMSAAARKYDLTPQLIGAIILAEQRDQ--T--RDEDAKDYQAAVSIKSA--------------------------N----------------------------------TS------IGLGQ-VVVSTAIKYE-LFT-DLLGQVRRGLSRKAVATLLASDEFNIFATARYIRYVANLASQQLDLAYPWRVRALASEYTSR-PWDD--NL-----------SPGWPMFVDDAYATFLDGMRFP | |||||||||||||
7 | 2dcoA | 0.19 | 0.02 | 0.09 | 0.32 | HHpred | --------------------------------------------------------------------------------------------------------------------TDCEELSGARTFRLAPAQWSCRETFQ------------------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
8 | 4luqA2 | 0.15 | 0.10 | 0.66 | 1.00 | MRFsearch | -----------------------GDLGAYLSQ-LSPQDKLNQAQTLVGQPPSRAKVMSAAARKYDLTPQLIGAIILAEQRDQT-RDEDAKDYQAAVSIK----------------------------------------------------------------------SANTSIGLGQVVVSTAIKYELFTDL-LGQPVRRGLSRKAVATLLASDEFNIFATARYIRYVANLASQQ---DLRKLPKTRGAFPSINWPRDNVRALASEYT-SRPWDDNLSPGWPMFVDDAYATFLDP- | |||||||||||||
9 | 4luqA2 | 0.14 | 0.10 | 0.75 | 0.95 | SPARKS-K | IQGPFSGVGATGVNPTDLPSIAFGDQLKLLNKQLSPQDKLNQAQTLVGFPDARAKVMSAAARKYDLTPQLIGAIILAEQRDQTR-DEDAKDYQAAVS------------------------------IKS----------------------------------------ANTSIGLGQVVVSTAIKY-ELFTDLLGQPVRRGLSRKAVATLLASDEFNIFATARYIRYVANLASQ---QDLRKLPKTRGAFIDLRAYARDNVRALASEYTSRPWDDNLSPGWPMFVDDAYATFLDPG | |||||||||||||
10 | 1d0kA | 0.12 | 0.09 | 0.78 | 0.89 | MAPalign | --------MQMGGDFANNPNAQQFIDKMVNKHGFDRPDNVQNGVVFWNQ---YEDALNRAWQVYGVPPEIIVGIIGV------------------ETRWGRVMGKTRIL-DALATLSF--NYPRRAEY-----FSGELETFLLMARDEQDDPLNLK----GSFAGAM--------GYGQFMPSSYKQYA------VDF--------SGDGHILWDPVDAIGSVANYFKAQAPGLPNGFKTQLAAAG--LTPQQPLGNHQQAS--LLRLDVGTGYQYWYHSTHYAMAVWQLGQAVALAR | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |