>PF07163 (301 residues) MKSDSSTSAAPLRGLGGPLRSSEPVRAVPARAPAVDLLEEAADLLVVHLDFRAALETCER AWQSLANHAVAEEPAGTSLEVKCSLCVVGIQALAEMDRWQEVLSWVLQYYQVPEKLPPKV LELCILLYSKMQEPGAVLDVVGAWLQDPANQNLPEYGALAEFHVQRVLLPLGCLSEAEEL VVGSAAFGEERRLDVLQAIHTARQQQKQEHSGSEEAQKPNQEGSVSHKFLSLPMLVRQLW DSAVSHFFSLPFKKSLLAALILCLLVVRFDPASPSSLPFLYKLAQLFRWIRKAAFSRLYQ L |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | MKSDSSTSAAPLRGLGGPLRSSEPVRAVPARAPAVDLLEEAADLLVVHLDFRAALETCERAWQSLANHAVAEEPAGTSLEVKCSLCVVGIQALAEMDRWQEVLSWVLQYYQVPEKLPPKVLELCILLYSKMQEPGAVLDVVGAWLQDPANQNLPEYGALAEFHVQRVLLPLGCLSEAEELVVGSAAFGEERRLDVLQAIHTARQQQKQEHSGSEEAQKPNQEGSVSHKFLSLPMLVRQLWDSAVSHFFSLPFKKSLLAALILCLLVVRFDPASPSSLPFLYKLAQLFRWIRKAAFSRLYQL | |||||||||||||||||||
1 | 4gyoA | 0.05 | 0.04 | 0.83 | 0.61 | DisCoVER | EYYFYYFRGMYEFKQKNFILAIDHYHAEKLEIKAEFLFKVAEV-YYHIKQTYFSMNYASQAL-DIYTK------YELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALEEAY-MIAAAYYNVGHCKYSLGDYKEAEGYFKTAAAIFEEHNFQQAVQAVFSLTH-IYCKEGKYDKAVEAYDRGISADDMYLTKFRLIHELYL---GSGDLNVLTECFDLLESRQ-LLA-DAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKL----------------------------------- | |||||||||||||
2 | 4cr2Z | 0.09 | 0.07 | 0.70 | 0.83 | DEthreader | ---------------------------GLDSAQQNLASS-FV--------G--FLNL-----------------N-NWVYKTMSAVASIGSI-YQWN-LD-GLQQLDKYLYVD-PVKAGALLGIGISASGVHEVEPALLLLQDYVTN-PDT-K-ISSAAI-LGLGIAFAGSKNDVLLLPIAASTDETIETDWVRFLALALGILYVCAYTGLVSVSDP----------------NN-LALLRQLASYYREQDALFITRLAQGLL-LGK--M----NLNKVTLASILTTAVGLVSPSFMLK-- | |||||||||||||
3 | 3sf4A | 0.09 | 0.09 | 0.97 | 0.51 | CEthreader | LEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYL-HDYAKALEYHHHDLTLARTIGD--------QLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDNDKVGEARALYNLGNVYHAKGKLQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAE | |||||||||||||
4 | 3sf4A | 0.09 | 0.08 | 0.92 | 0.90 | EigenThreader | ALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGD--------QLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDRALYNLGNVYHAKGKSQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIDKAAERRAYSNLGNAYIFL---GEFETASEYYKKTLLLARQLAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL------------NDRIGEGRACWSLGNAYTALGNH | |||||||||||||
5 | 5mpbP | 0.11 | 0.09 | 0.81 | 0.38 | MRFsearch | ------------------------------SQILKEEFPKIDSLAQ--NDCNSALDQLLVLEKKTRQ--------ASDLASSKEVLAKIVDLLASRNKWDDLNEQLTLLSKQLKLSIQYMIQKVMEYLKSSKDLNTRISVIETIRVVTENIFVEVERARVTKDLVEIKKEEGKIDEAADILCELQSMEMSEKIQFILEQMELSILKG----------DYSQATVLSRKILKLKLEYYNLLVKISLHKSDEAKWKPVLSHIVYFLVLSPY---GNLQNDLIHKIQNSQESLVKLFTT----- | |||||||||||||
6 | 4hnwA1 | 0.15 | 0.12 | 0.80 | 0.87 | FFAS-3D | --------------------------------KENDQFLEALKLYE-GKQYKKSLKLLDAILKK----------DGSHVD---SLALKGL-DLYSVGEKDDAASYVANAIRKIESASPICCHVLGIYMRNTKEYKESIKWFTAALNN-GSTNKQIYRDLATLQSQ-----IGDFKNALVSRKKYWEAFLGERQQAINTLSQFEKLAEGKISDSEKYEHSKAASDNQDKLQNVLKHLNDIEPCVFDKFGLLERKATIYMASIVYRTLIKRNPDNFKYYKLLEVSKALYGKLEQF-------- | |||||||||||||
7 | 1hz4A | 0.10 | 0.09 | 0.95 | 0.74 | SPARKS-K | RAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGE-LTRSLALMQQTEQMARQH--------DVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQ-PQQQLQCLAMLIQCSLARGDLDNARSQLNRLNGYHSDWISNANKVRVIYWQMTGRHTAKPEFANNHFLQGQWRNIARAQILVLEELNENARSL---RLMSDLNRNLLLLNQLYWQAGR-KSDAQRVLLDALKLANRTSHFVIEGEAMA | |||||||||||||
8 | 1hz4A | 0.12 | 0.09 | 0.78 | 0.92 | CNFpred | ---------------------------------ALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQL------PMHEFLVRIRAQLLWAWARLDEAEASARSGIEV-PQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFQGQWRNIARAQILLG--------------------EFEPAEIVLEELNENARSLR-------LMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALKLANRTGISHFVIEGEA | |||||||||||||
9 | 6z2wE | 0.06 | 0.05 | 0.79 | 1.00 | DEthreader | ENNIMK-ND--T---FS-TVS--------------RLIDDFLNMRKLSWCKKQLTAHFENTMNLYEQATEVGKTELKFYDTLKGLYILLYWFTSTFGLGFKFDFNFQRLIRIVLVFQLKYISLVVDYVCNRLCLKFVLTTMHHFLDNKYGL-LD-NDPTMAKGILRLYSLCISFVPIDWAEHFPFTQLNKANSFDLEKLRLLVLKKFNKTER--DN---NEDPLRT-LSFLSYKNTTILDYRME-RIGADFPNHYILSMRKSFD-QL--KM-----------------------------T | |||||||||||||
10 | 1xnfB | 0.11 | 0.09 | 0.83 | 0.56 | MUSTER | ---SWRKSEVLAVPLQPTLQQEV-ASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPD---------------PEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTY-NYAHLNRGIALYYGGRDKLAQDDLLAFYQD-DPNDPFRSLWLYLAEQK------LDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLERLKADATDNT--SLAEHLSETNFYLGKYYLSLGD----------LDSATALFKLAVANNVHNFVEHRYALLELSLLGQD----------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |