>PF07156 (362 residues) EETDWYLLNLFRLWWRYGISFLRLQMWVEEIMEKFMRIYKYQAYGHAFSTVEELLRSLGG DRFVNMTHRSVAESLLELGVSQRFIDEVIAAVMRVNYGQSVSIPAFVGAVSLVGAQANLW SVEGGNKLVCSGLLKLANANLIHGKVTAISLHNSEENTLYKVRYETEEENQSDLYDIVII AFPLHHEMANITFEDFKPPITAFPGSYHHTVSSIIHGYLNSSYFGFPDPKLFPFASILTT DSPDLFFSSIGNICPVNISSAFRRKQPQEAAIWKVFSHQPLSKQELKTLFRSYYSVQDTD WLAYPHYNSDKKIPPIILHNNLYYLNGIEWAASAMEMSAVGAKNVALLAYNRWYQHLDKI DQ |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | EETDWYLLNLFRLWWRYGISFLRLQMWVEEIMEKFMRIYKYQAYGHAFSTVEELLRSLGGDRFVNMTHRSVAESLLELGVSQRFIDEVIAAVMRVNYGQSVSIPAFVGAVSLVGAQANLWSVEGGNKLVCSGLLKLANANLIHGKVTAISLHNSEENTLYKVRYETEEENQSDLYDIVIIAFPLHHEMANITFEDFKPPITAFPGSYHHTVSSIIHGYLNSSYFGFPDPKLFPFASILTTDSPDLFFSSIGNICPVNISSAFRRKQPQEAAIWKVFSHQPLSKQELKTLFRSYYSVQDTDWLAYPHYNSDKKIPPIILHNNLYYLNGIEWAASAMEMSAVGAKNVALLAYNRWYQHLDKIDQ | |||||||||||||||||||
1 | 4repA | 0.11 | 0.10 | 0.89 | 1.17 | DEthreader | ----KSQEDASKVFKEEKSTIKKYLAKSKSKYELTKSLFLEK-SLHKATFSLD-TVK-AIVHAPLGLNNTLNDENS--KFKNPKLTQLFNRYAT-YNGSSPYQTPGIMTMIPHLELLGTYYPDGGMHRISQSLFLAVGVKFRFESVTNITTSKN---KVTGVETK----NGSYLSDLVVSNMDIVPTYRNLMKDVPAPEKTLSQERSSSALIFYWGIDREF-------P--ELDLHNILFSDEQDPTVYINITSESSND------APAGHENWFVMINAVESKKQIIAIIKHITTEYILTPGLYAASNNKFALRHPFNIKNLYHVGGSVHPGGGIPLCLLSAQITADLIQKEQLE------- | |||||||||||||
2 | 4repA | 0.09 | 0.09 | 0.91 | 1.17 | DEthreader | IFHYLFKASFDASVFKEEKTIKKYLAKSKSKYELTKSLFLEK-SLHKAYFSLD-TVKAIVHAPFLGLNNTLNDENS--KFKNPKLTQLFNRYAT-YNGSSPYTPGIMTMIPHLELGGTYYPDGGMHRISQSLFELAQVVKFRFESVTNITTSKN---KVTGVETK----NGSYLSDLVVSNMDIVPTYRNLMKD-V-PAPETLSQERSSALIFYWGIDREF-------P-ELDLHNILFSEDEQDPTVYINITSKSSND--A---PAGHENWFVMINALVESKKQIIAIIKHITTEYILTPGLYAASNNKFALRHPFNIKNLYHVGGSVHPG-GGI--PLCLLS-AQITADLIQKEQLE--- | |||||||||||||
3 | 1gosA | 0.10 | 0.09 | 0.88 | 1.42 | HHpred | ------QNRILRLAKELGLNPITY-LDHNNFWRTMDDMGREIPSDAPWKA-------P---LAEEWDNMTMKELLDKLCWTES-AKQLATLFVNLCVTAETHVSALWFLWRIITNGGQERKFVGGSGQVSERIMDLLGDRVKLEPVIYIDQTRE----NVLVETLN---HEMYEAKYVISAIPPTLG-MKIHFNPPLPMMMITRVPLGSVIKCIVYY--KEPFWRKK--DY--CGTMIIDG-EEAPVAYTLDDTK----------PEGNYAAIMGFILARLTKELYAKVLGSPVHYEEKNWCEEQYFPPGILGRVLQPVDRIYFAGTTATWSGYMEGAVEAGERAAREILHAMGKIPEDE-- | |||||||||||||
4 | 4i58A | 0.10 | 0.09 | 0.83 | 0.72 | DisCoVER | -PSGKPGD-DT-YI-VAGLRADALDELADSVG--W---------------D--QP--WASPNAAALDSKTVATWLAET-IESEEVRRLHTVIVNTLLGADPEVSLLYWAYYVSECLMGTRQWFGGAAQVSWRIADAIRDKFLEWPVDRIEHD----ESGVTLFSG----QRSLRARHIVIAMSPLAAN-QIRFEPLPTSRAQLQARAPMGRYYKVQARYPSSFWVEQG--YS-G-ALLDTE----DVGVFLLDGTKPT-------DTLATLIGFIGGSNYDRERAFLDLPSYFHETDWTGPVTYMPPGVLANFGALRPVGKVHFAGEASFQWSGMEGGVRAGQKAAAAIA------------ | |||||||||||||
5 | 6cr0A | 0.15 | 0.13 | 0.84 | 0.23 | MRFsearch | ----WCQPHVFAEMQRYGFGFATFDEEYTTAFEKFCSRSRELF----------------NHEVSNLDGVSARDHLESLG-LNELQLASMNAELTLYGGAPTSYPSFVKFHALASWDEKRYHVQGGTNALCQAIFDDCRADSEFGPVEAVAQTD----NGVTVTLA---DKRVFRALTCVLTLPTKVYA-DVRFEPPLPPEKRAFAEMADGAELYVHVRQ-----------NLGNTFTFCDD--PNPFNAVQTYAYD---------DELGTILKITIGRQDAIAAEIRKIHGDVLEALPYNWAMYPAMRKGWFSRMAKPENRLFFAGSATAWHEYIDGAIESGIRVGREIRHFMK-------- | |||||||||||||
6 | 5mogA | 0.12 | 0.12 | 0.94 | 1.36 | SPARKS-K | AWKDEDGDWYETGLHIFFGAYPNIQNLFGENGIWAILRNNEMLTWPEKVKFALGLLPAMQAYVEAQDGFTVSEWMKKQGVPDRVNDEVFIAMSKALNFINPELSMQCILIALNRHGSKMAFLDGNPERLCMPIVDHVRGEVRLNRIQKIELNP--DGTVKHFALT---DGTQITGDAYVFATPVDILKLLV-PQEWKEIKKLEKLVGVPVINVHIWFD--------RKLKNTYDHLLFSRSSLLSVYADMSVTCK-------EYYDPNRSMLELVFAPEEWVGQELAKLFPKILKYHVVKTPSVYKTIPDPCRPLQRSIEGFYLAGDYTKYLASMEGAVLSGKLCAQSVVEDYKMLSRRSL- | |||||||||||||
7 | 6cr0A | 0.10 | 0.09 | 0.83 | 1.03 | MAPalign | --GQKIDVPPATFDEEY---TTAFEKFC-SRSREL-------------FPRPYSPLDN--HEVSNLDGVSARDHLESLGLNELQLASMNAE-LTLYGGAPTTLSYPSFVKFHATDSEKRYHVQGGTNALCQAIFDDCRADSEGVPVEAVAQTD----NGVTVTLAD---KRVFRALTCVLTLPTKVYA-DVRFEPPPEKRAFIHAEMADGAELYVHVRQ-----------NLGNTFTFCDD--PNPFNAVQTY-AY---------DDELGTILKITIGRQLIAAEIRKIHVEVLEALPYWATSYPAMRWFSRYDMAKPENRLFFAGTADGWHEYIDGAIESGIRVGREIRHFM--------- | |||||||||||||
8 | 4repA | 0.09 | 0.08 | 0.96 | 0.70 | CEthreader | TDSSQFIEDASKVFKEEKSTIKKYLAKSKSKYELTKSLFLEKSLHKATTYFSLDTVKAIVHAPFLGLNNTLNDENSKFKN--PKLTQLFNRYATYNGSSPYQTPGIMTMIPHLELGLGTYYPDGGMHRISQSLFELAKVGVKFRFRESVTNITTSKNKVTGVETKN----GSYLSDLVVSNMDIVPTYRNL--MKDVPAPEKTLSQERSSSALIFYWGIDREFPELDLHNILFSEFEHIFEHKTLAQDPTVYINITSKESSNDAPAGHENWFVMINAPGDYGKKQIIAKIKHITTEYILAASNNKFAAFLRHPNFNGKIKNLYHVGGSVHPGGGIPLCLLSAQITADLIQKEQLE------- | |||||||||||||
9 | 3i6dB | 0.11 | 0.10 | 0.90 | 0.85 | MUSTER | KKDGYIIKSAPQLVKDLGLEHLLVNNATGQSY-----VL-VNRTLHPMPKKARAAMDFILPASKTKDDQSLGEFFRRR-VGDEVVENLIEPLLSGIYAGDIDLSLMSTFPQFYQTQGQFQTLSTGLQTLVEEIEKQLKLKVYKGKVTKLSHSGSC----YSLELD---NGVTLDADSVIVTAPHKAAAGML--SELPAISHLKNMHSTSVANVALGFP------EGSVQMEHEGTGFVISRNSDFAITACTWT-----NKKWPHAAPEGKTLLRAYVGKALSLEDLKKVMNEPEMTCVTRWHSMPQYHVKQRIKELRAYPGVYMTGA-SFEGVGIPDCIDQGKAAVSDALTYLFS------- | |||||||||||||
10 | 2iveA | 0.12 | 0.11 | 0.89 | 1.82 | HHsearch | LDRE---PATRALAAALNLEGRAADPAA-----KRRYVYTRGRRSSDILPLGARLRVAGERRAPEGVDESLAAFGRRH-LGHRATQVLLDAVQTGIYAGDVELSVAATFPGAIPLSGALSTFDGGLQVLIDALAASLGDAAHVGRVEGLAREDG----GWRLIIEEHGRRAELSVAQVVLAAPAHAT-AKLL-RPLDDALAVAGIAYAPIAVVHLGFDAGT-LPAPD------GFGFLVPAEEQRRMLGAIHASTTF-PF----RAEGGRVLYSCMVGGEQDEEELKALAGRPSFTRVFRWPGIPQYNLGHLVAALQRLPGLHLIGNAY-KGVGLNDCIRNAAQLADALVA----------- | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |