>PF07136 (241 residues) MPIIRGMFAFIDSMVIGVQALTFSAEFFEDEEPKEEKKASKLDEFMEKNMIAIAVLLSIA FSTGLFILLPTLAVSLLGKVSKTPLLMNLVEGVVRIAIFIGYIALISQMKDIKRVFEYHG AEHKTIFCYENGEELTVENVRKHKRLHPRCGTSFLFIVMIVSILLFSFFRWPSLPVRLIT RILLLPVVAGISYEIIKWAGRSDSKLVCTISAPGLWLQKITTREPDDSQIEVAITALKNV L |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | MPIIRGMFAFIDSMVIGVQALTFSAEFFEDEEPKEEKKASKLDEFMEKNMIAIAVLLSIAFSTGLFILLPTLAVSLLGKVSKTPLLMNLVEGVVRIAIFIGYIALISQMKDIKRVFEYHGAEHKTIFCYENGEELTVENVRKHKRLHPRCGTSFLFIVMIVSILLFSFFRWPSLPVRLITRILLLPVVAGISYEIIKWAGRSDSKLVCTISAPGLWLQKITTREPDDSQIEVAITALKNVL | |||||||||||||||||||
1 | 3dh4A | 0.08 | 0.05 | 0.71 | 0.67 | DisCoVER | QFIGMSGSGYS-----------------------------------------------GLAIASY-EWMSAI----------TLIIVGKYFLPIFI--TIPEFVEKRFNKKLK-LYIFNLTSVLYLGGLALEIPL-MYSILGLAFALDQVFFLVLGTTQRTLVSEAQKGIVFAAFLKL-IVPFLVVLPGDKAYPWL--TQFLPVGVKGVVF-AALAAIVSSLMLLI--ACLIAPMLGGIA- | |||||||||||||
2 | 4a01A | 0.08 | 0.06 | 0.75 | 0.83 | DEthreader | ----------------GLGMKIATYANA-RT-T-LEARKGGKAFITAFRSGA-VMGFLLAANGLLVLYIAINLFKIYYG-DDWG-GLFEAITGYGLG-GS-MA------------G--GGGIYTKAADVG-DLVG-RNPAVADGDGDIGMGSDLFGSYAESSCAALVVASGHELTAMLYPLIVVLGMLSGFAIGSAA-----AMLPYWF--M------------DYATCVKISTDAS-KEM | |||||||||||||
3 | 1ciiA | 0.08 | 0.08 | 1.00 | 0.52 | CEthreader | QAELREYGFRTEIAGYDALRLHTESRMLFADREARSLIEQAEKRQKDAQNADKKAADMLAEYERRKGILDTRLSELEKNGGAALAVLDAQQARLLGQQTRNDRAISEARNKLSSVTESLNTARNALTRAEQGDPRFAGTIKITTSAVIDNRANLNYLLSHSGLDYKRNIRNPVVTEDVEGDKKIYNAEVAEWDKLRQRLLDARNKITSAESAVNSARNNLSARTNEQKHANDALNALLKEK | |||||||||||||
4 | 7a23I | 0.08 | 0.07 | 0.93 | 0.72 | EigenThreader | DAFEFIVLILLSTCGMLFMISLCFYVIAASKRKSLFGCSMIYGSTGADQLAKILIFMGILFIAVGFLFKIPDIYEGS-----PTPVTAFLSIAPKISIFANILRVFIYGATLQQIFFFCSIASMILGALAAMAQAYSSIGHVGYICIGFSCQSLLIGIFIYALMTMDAFAIVLALILAITFSIT------------MFSYAGIPPLAGFCSKFYLFFAALGCGAYFLALVGVVTSVIGCFY | |||||||||||||
5 | 5tj5A | 0.15 | 0.13 | 0.83 | 0.35 | HHpred | ----HGFLMTLAALSLVLNEKKINKMLYNGTEN-ALLFSNSYK---MKLSILIHMTYSYFFSLGIFGYLSVCIVYWAVDWVAPGLLNMLINAKVQVFLLLMALVCIPWLLLVKPLHFKF--DHQVIHTIEFCLN-CVSHTASYLRLWAQL--SSVLWTMTIQIA----FGFRGF-VGVFMTVALFAMWFALTCAVLVLMEGT-SAMLHSLRLHWVESMSK--------------------- | |||||||||||||
6 | 3k07A2 | 0.14 | 0.12 | 0.92 | 0.53 | MRFsearch | ---ANIMSLGGIAIAVGAMVENAHKRLEEWKTRWQVITDASVEVGPALFISLLIITLSFTYAMAGAALLAIVVIPILMGYFLIRVYHPLLLKVLHWPKTTLLVAALSVLTVLWPLNKV-------------GGEFLPGQFELLERANHKLKLMVPMTLMIIFVLLYLAFR---RVGEALLIISSVPFALVGGIWLLWWMGFSVATGTGFIALAGVAAEFGVVMKLDEALYHGAVLRVRPKA | |||||||||||||
7 | 5c6gA | 0.10 | 0.09 | 0.93 | 0.90 | FFAS-3D | --LFQSVSYLTTSTKFLPKVLKTSQELKETLQKRTSLVHVQSIRNIYDKVVDLCRFYQTWESLILYNILLEAISSQQAQQADLSHVGRLYSTLLRLIGIAHLYTLIVAWEQLQHAYLSSSLVQAILWAISRFEPFSMQQLNEFFTDNALFKKKSLLLHFLLNYLGGTMLVSD------------VQKRCDISSSCFQMGKQQYMPGMRYVA--GIWHLMNSTVAMKTKEVAITRAKLEGLV | |||||||||||||
8 | 5u71A1 | 0.10 | 0.10 | 0.97 | 0.97 | SPARKS-K | MGFFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLK--AGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAIAVVAVLQIFVATVPVIVAFIMLRAYFLQTSQQLKQLESEGRPIFTHLVTSLKG----LWTLRAFGRQ-PYFETLFHKALNLHTANWFLYLSTLRWFQMRIEMIFVIFFIAVTFISILT-TGEGEGRVGIILTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVF | |||||||||||||
9 | 3rkoC | 0.10 | 0.08 | 0.84 | 0.99 | CNFpred | ---GLSLLMVVLTGLLGVLAVLCSWKEI-----------EKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPM---YFLIALWG-AATKFFIYTQASGLVMLIAILALVFVHYN----------VWTFNYEELLNTPMS---GVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAA---YGLLRFSLPLFPNASAEFA----PIAMWLGVIGIFYGA | |||||||||||||
10 | 6w4sF | 0.08 | 0.06 | 0.72 | 0.83 | DEthreader | --------------------AVSVFLVELYGFLHKHELLYGVLTSCYILIITIANIANLASTATAITIQRDWIVVVA--G--E--DR-SKLANMNATIRRIDQLTNILAPMAVGGFDCITTGYAQLCVISVFM--PIISVSLLFAGVIAARIGLWSFDLTVTQLLQENVIE-S--ERGIINGVQNSMNYLLDHISVSFVAMGHI-YF---------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |