Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | MPIIRGMFAFIDSMVIGVQALTFSAEFFEDEEPKEEKKASKLDEFMEKNMIAIAVLLSIAFSTGLFILLPTLAVSLLGKVSKTPLLMNLVEGVVRIAIFIGYIALISQMKDIKRVFEYHGAEHKTIFCYENGEELTVENVRKHKRLHPRCGTSFLFIVMIVSILLFSFFRWPSLPVRLITRILLLPVVAGISYEIIKWAGRSDSKLVCTISAPGLWLQKITTREPDDSQIEVAITALKNVL |
1 | 3dh4A | 0.08 | 0.05 | 0.71 | 0.67 | DisCoVER | | QFIGMSGSGYS-----------------------------------------------GLAIASY-EWMSAI----------TLIIVGKYFLPIFI--TIPEFVEKRFNKKLK-LYIFNLTSVLYLGGLALEIPL-MYSILGLAFALDQVFFLVLGTTQRTLVSEAQKGIVFAAFLKL-IVPFLVVLPGDKAYPWL--TQFLPVGVKGVVF-AALAAIVSSLMLLI--ACLIAPMLGGIA- |
2 | 4a01A | 0.08 | 0.06 | 0.75 | 0.83 | DEthreader | | ----------------GLGMKIATYANA-RT-T-LEARKGGKAFITAFRSGA-VMGFLLAANGLLVLYIAINLFKIYYG-DDWG-GLFEAITGYGLG-GS-MA------------G--GGGIYTKAADVG-DLVG-RNPAVADGDGDIGMGSDLFGSYAESSCAALVVASGHELTAMLYPLIVVLGMLSGFAIGSAA-----AMLPYWF--M------------DYATCVKISTDAS-KEM |
3 | 1ciiA | 0.08 | 0.08 | 1.00 | 0.52 | CEthreader | | QAELREYGFRTEIAGYDALRLHTESRMLFADREARSLIEQAEKRQKDAQNADKKAADMLAEYERRKGILDTRLSELEKNGGAALAVLDAQQARLLGQQTRNDRAISEARNKLSSVTESLNTARNALTRAEQGDPRFAGTIKITTSAVIDNRANLNYLLSHSGLDYKRNIRNPVVTEDVEGDKKIYNAEVAEWDKLRQRLLDARNKITSAESAVNSARNNLSARTNEQKHANDALNALLKEK |
4 | 7a23I | 0.08 | 0.07 | 0.93 | 0.72 | EigenThreader | | DAFEFIVLILLSTCGMLFMISLCFYVIAASKRKSLFGCSMIYGSTGADQLAKILIFMGILFIAVGFLFKIPDIYEGS-----PTPVTAFLSIAPKISIFANILRVFIYGATLQQIFFFCSIASMILGALAAMAQAYSSIGHVGYICIGFSCQSLLIGIFIYALMTMDAFAIVLALILAITFSIT------------MFSYAGIPPLAGFCSKFYLFFAALGCGAYFLALVGVVTSVIGCFY |
5 | 5tj5A | 0.15 | 0.13 | 0.83 | 0.35 | HHpred | | ----HGFLMTLAALSLVLNEKKINKMLYNGTEN-ALLFSNSYK---MKLSILIHMTYSYFFSLGIFGYLSVCIVYWAVDWVAPGLLNMLINAKVQVFLLLMALVCIPWLLLVKPLHFKF--DHQVIHTIEFCLN-CVSHTASYLRLWAQL--SSVLWTMTIQIA----FGFRGF-VGVFMTVALFAMWFALTCAVLVLMEGT-SAMLHSLRLHWVESMSK--------------------- |
6 | 3k07A2 | 0.14 | 0.12 | 0.92 | 0.53 | MRFsearch | | ---ANIMSLGGIAIAVGAMVENAHKRLEEWKTRWQVITDASVEVGPALFISLLIITLSFTYAMAGAALLAIVVIPILMGYFLIRVYHPLLLKVLHWPKTTLLVAALSVLTVLWPLNKV-------------GGEFLPGQFELLERANHKLKLMVPMTLMIIFVLLYLAFR---RVGEALLIISSVPFALVGGIWLLWWMGFSVATGTGFIALAGVAAEFGVVMKLDEALYHGAVLRVRPKA |
7 | 5c6gA | 0.10 | 0.09 | 0.93 | 0.90 | FFAS-3D | | --LFQSVSYLTTSTKFLPKVLKTSQELKETLQKRTSLVHVQSIRNIYDKVVDLCRFYQTWESLILYNILLEAISSQQAQQADLSHVGRLYSTLLRLIGIAHLYTLIVAWEQLQHAYLSSSLVQAILWAISRFEPFSMQQLNEFFTDNALFKKKSLLLHFLLNYLGGTMLVSD------------VQKRCDISSSCFQMGKQQYMPGMRYVA--GIWHLMNSTVAMKTKEVAITRAKLEGLV |
8 | 5u71A1 | 0.10 | 0.10 | 0.97 | 0.97 | SPARKS-K | | MGFFRGLPLVHTLITVSKILHHKMLHSVLQAPMSTLNTLK--AGGILNRFSKDIAILDDLLPLTIFDFIQLLLIVIGAIAVVAVLQIFVATVPVIVAFIMLRAYFLQTSQQLKQLESEGRPIFTHLVTSLKG----LWTLRAFGRQ-PYFETLFHKALNLHTANWFLYLSTLRWFQMRIEMIFVIFFIAVTFISILT-TGEGEGRVGIILTLAMNIMSTLQWAVNSSIDVDSLMRSVSRVF |
9 | 3rkoC | 0.10 | 0.08 | 0.84 | 0.99 | CNFpred | | ---GLSLLMVVLTGLLGVLAVLCSWKEI-----------EKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPM---YFLIALWG-AATKFFIYTQASGLVMLIAILALVFVHYN----------VWTFNYEELLNTPMS---GVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAA---YGLLRFSLPLFPNASAEFA----PIAMWLGVIGIFYGA |
10 | 6w4sF | 0.08 | 0.06 | 0.72 | 0.83 | DEthreader | | --------------------AVSVFLVELYGFLHKHELLYGVLTSCYILIITIANIANLASTATAITIQRDWIVVVA--G--E--DR-SKLANMNATIRRIDQLTNILAPMAVGGFDCITTGYAQLCVISVFM--PIISVSLLFAGVIAARIGLWSFDLTVTQLLQENVIE-S--ERGIINGVQNSMNYLLDHISVSFVAMGHI-YF---------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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