Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MSRHGNIDIGCGAGNTMDATFRSCTPHESFYYLSINHDLKAREAQNNNTNSDTICFSTHLHKRSNRRLDRRCEYIFGICSIKGNSAARRKKFLKTPLCQRYVNNCLKYMHSICHYQTRPGRTSS |
1 | 6sclA | 0.07 | 0.05 | 0.72 | 0.62 | DisCoVER | | VDLKANSSGAFKITSIRVEFKSHATAGAIFIELDTACSYINSFTISK---TASKTFRSEA-------INGIDQFWMLYKANGTTT--DT-AGQFIITM--SV-SL------------------- |
2 | 3l2gB | 0.04 | 0.03 | 0.88 | 0.83 | DEthreader | | --PLIRCGRSLPRRLVEKVVSDALLLAGKY-Y-PLTTMNE-DQEQLIED-H--F-LFEKPTG-LTARWPDGRGIWIIRVISMVRFARGLLEVERMKHGLMHYICT-CP-N--GE-SSDSNWARL |
3 | 6tjhA1 | 0.08 | 0.08 | 1.00 | 0.57 | CEthreader | | IGEDGTIYVGSNDGHLYAIASPVIGEDGTIYVGSNDGHLYAINPDGTEKWRFKTGKAIEASPVIGEDGTIYVGSNDGHLYAINPDGTEKWRFKTGKAIEASPVIGEDGTIYVGSNDGHLYAINP |
4 | 1fwxA1 | 0.03 | 0.03 | 0.94 | 0.55 | EigenThreader | | NAKGIHGLRPQKWPRSNYVFCNGEDEGNLDNCDADYWAFSTSYNSETAAEMDHIVVFNIAEIEKAIAAGNPHGCNMACVAGKLSP----TVTV--LDVTRFDAVFYEEDAIRAYAGEKVDPI-K |
5 | 5cvuB3 | 0.12 | 0.10 | 0.88 | 0.34 | HHpred | | -GLTTIVDVGGGTGAVASMIVAKY-PSINAINFDLPHGVEGGDMFDGVPKGDAIFIKWICHDWSDEHCLKLLKNCYGKVIVLPPSPDP-------SIATKVV-IHTDALMLAYNPGGKE----- |
6 | 2np6A1 | 0.12 | 0.09 | 0.76 | 0.42 | MRFsearch | | ----RVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALD---------WAEGILADFLLWE----PGEAFDLILGNPPVFKAVKDLYKKAFSYNLYGAFLEKAVRLLKP------------- |
7 | 2fcaA | 0.11 | 0.09 | 0.82 | 0.37 | FFAS-3D | | ------IEVGTGKGQFISGMAKQ-NPDINYIGIELFKSVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFSDPWPKKRHEKRRL---TYSHFLKKYEEVM--------GKG---- |
8 | 4ckbA3 | 0.10 | 0.09 | 0.93 | 0.58 | SPARKS-K | | --KENTIDQTANVVFRMSIIFGESSIFVEYKKFSNDGKIVLYNGVNYLNNIYCLEYINTHNEVGIKSVVVPIKFIAEFLV-NGERIDKTMKYINSEYGNQH-NIIVEHLRDQSIKIGDI----- |
9 | 2fcaA | 0.08 | 0.06 | 0.81 | 0.46 | CNFpred | | -----HIEVGTGKGQFISGMAKQNPD-INYIGIELKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEGEVKRVYLNFSDPWPKKRHEKRRL---TYSHFLKKYEEVMG-------------- |
10 | 1fa2A | 0.07 | 0.06 | 0.80 | 0.83 | DEthreader | | DI---F-YTNRA-----G--NRNQEY-LSLG---------YPSYPEWVF-PGIGEFQCMVAD-WKEAVKADWEMP-GKGAGTNDTKTEFRGTYKTDMGKFFLTWYSNKLIIHGDQVLEANVFV- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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