Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | MTEKEEKEDLQAQDKEEQQNKADTKVISAQEFEEYMRFKEQANSKSKETSRDLSINERITKELAEVEERERIKKQLLLEAERINEIDTLAKAHLSNHFNKEVLLAKGYTLKDIMQAQRRELVRKFVPIEQIKAIAKVSDISHIDGEMLEQLVSLAKVNIKLRKTASSNFSSVDSVRGNIVVKSEERASLLDSNFVPINFTEFVQAISNTYKQRRIQFYENLKR |
1 | 6vj4A | 0.10 | 0.04 | 0.42 | 0.86 | DisCoVER | | ----------------VKDHYKPEIKASH--IL--V------------------SD--------------------------ENEAKEIKKKL---------------------------FE-ELA----KQES----------QDLLSKEK-GGDLGYFHSGEALKIGQISDPVQNGYHIIK--LTGKKDLIRKNLEEERT--------------------- |
2 | 5amqA | 0.06 | 0.04 | 0.81 | 0.83 | DEthreader | | KDYSEHISKSAK-NI-LASGFYKQPNKISEGWTLMVERVQDQRE--EVSKPKILDFDMYA-PGCLSRAIRLRCQRIVSSPGLFLTTCLLFKHDNPTLVMSDIMN-FSIYTSLS--------A--MIMNSLVYI-EKFS-PYTFSVYMTRLIK-NACFDAYDQR-QR-VQL-------------DNRELTS-PGSVTLKYLTQIYLPFYF--NA-KGLHE---- |
3 | 6yvgA | 0.12 | 0.11 | 0.97 | 0.66 | CEthreader | | DNVITTLSRLKPFDLAMLKATSDNKVKTLLDSDELKPFWVNKFNRNPDPQSRADFYCGYVLYLAALKEKISSYYDYLNLSFTFYAAQEILTFLIGACSQSTQIQEHKTPGCLLLANAYFYLAGFYLSLDLKAESIE---CYKECWGQLHLAQLLETDSEREIHNAYFNKGLATSNAFGLNSISEIKARCLDLASEALPYPARNVMEANAVKTFENRFKD---- |
4 | 5givA | 0.08 | 0.08 | 0.95 | 0.77 | EigenThreader | | PEQARMVQVARQDFEKATRIPAEFV----REFSGHVGQSYSAWTEARPANDPYLEKTLDLSLQAASYADAVIAAGFLGRERQLAFGERVIRDYGYDFRRGRQDLTHHPALYSTLHEAGHALYEQGVDA-------AFLGGGGVSAGVHESQSRLWENLYNLHVITRFELEREMLAFGPIGGSFQGYTIGNVLSAQFYAAAEAANWLRENVYLKYLRGKYGELY |
5 | 5ze9A3 | 0.22 | 0.12 | 0.52 | 0.29 | HHpred | | ----------------------------LQEEEQLNEIVRL------VGIDSLSDNDRLTLEVAKSIREDYLQNAFDDTFTSREKQFNMLKVILTFGKEARKALSLGAYFNEIMEGVRERISRKYIPEEELAK------ISSINEEIKETIQLIVSE------------------------------------------------------------------ |
6 | 5yfpA1 | 0.10 | 0.08 | 0.74 | 0.48 | MRFsearch | | --IEDDADSMIERIDLRL------AETEYLFNQNLLSLQKIGP----------NIRPYEDKVNDECHRIIPTLSLFLMEMSNSNDIENVESQDNGLQVE--------SANKKLLWNTLDELLKTVLDEISLNQLLECKNLPWMENQLNLLLKAFQAIGSD-------------------------------GNEVEYNLREILKQRLQFYEKVTKIFLNRIVE |
7 | 3k66A | 0.16 | 0.13 | 0.81 | 0.76 | FFAS-3D | | --EHDDFKKAEMRMDEKHRKKVDKV---MKEWGDLERYNEQKAKDPKGAEKFKQMNARFQKTVSSLEEEHKRMRKEIEAVERVQAMLNEKKRDATHDYNKHSVLQ---SLKAYIRAEEKDRMHTLNRYRHLLK-ADSKEAAAYKPTVIHRLRYIDL-------------------------RINGTLAMLRD--FPDLEKYVRPIAVTYWKDYRDE------- |
8 | 6yvuA | 0.10 | 0.10 | 1.00 | 0.76 | SPARKS-K | | HTSIRETLENGETRMKMLNEFVKKTSEEIDSLNEDVEEIKLQKEKELHKSKGLLNESRLKTSLSIKVENLNDTTEKSKALESEIASSSAKLIEKKSAYNTEKDYKMVQEQLSKQRDLYKRKEELVSTNAQLAKAKTELNEVSLAIKKSSMKMELLKKELLTIEPKLKEATKDNELNVKHVKQCQETCDKLRARLVEYGFPSRIKDLKQREDKLKSHYYQTCKN |
9 | 6vfkB | 0.15 | 0.13 | 0.86 | 0.67 | CNFpred | | IDILAESSKKSIEELARAADNKTTEKAVAEAIEEIARLATAAIQLIEALAKNLASEEFMARAISAIAELAKKAIEAIYRLAAIAAIANLAVTAIL----AIAALASNHTTEEFMARAISAIAELAKAIEAIYRLADNHTTDKFMAAAIEAIALLATLAILA---------IALLAS-------------------NHTTEKFMARAIMAIAILAAKAIEAIYR |
10 | 1st6A | 0.07 | 0.05 | 0.78 | 0.83 | DEthreader | | --------------------------PVAQQISHLVIMHEEGEVDGKYSVPARDYLIDGSRGILSGS--L--LTS-WD-EDAWASKDTEAMKRALAGKGLARRNTRPVKAAKAARGLAEGRRLANVMMYR-D------KDLKARM-QEAMTQEVSDVFSDTTTPIKLLAVAATAPGNAYFEKNQWIVEM------LLDASEA-IV-REN-DKRIRTNLLQVCE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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