Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | NSEVHNEDGRNGDVSQFPYVEFTGRDSVTCPTCQGTGRIPRGQENQLVALIPYSDQRLRPRRTKLYVMASVFVCLLLSGLAVFFLFPRSIDVKYIGVKSAYVSYDVQKRTIYLNITNTLNITNNNYYSVEVENITAQVQFAKTVIGKARLNNITHIGPLDMKQIDYTVPTVIAEEMSYMYDFCTLISIKVHNIVLMMQVTVTTTYFGHSEQISQERYQYVDCGRNTT |
1 | 1yycA | 0.14 | 0.11 | 0.73 | 1.15 | CEthreader | | --------------------------------------------------GHHHHHHLEASADEKVVEEKASVISSLLDKAKGFFAIPTPEATVDDVDFKGVTRD------GVDYHAKVSVKNPYSQSIPICQISYILKSATRTIASGTIPDPGSLVGSGTTVLDVPVKVAYSIAVSLMKDMCTD-----WDIDYQLDIGLTFDIVVGDITIPVSTQGEIKLPSLRD |
2 | 1yycA | 0.14 | 0.09 | 0.67 | 1.17 | MRFsearch | | --------------------------------------------------------------EKVVEEKASVISSLLDKAKGFFAEK-LANIPTPEATVDDVDFKGV-TRDGVDYHAKVSVKNPYSQSIPICQISYILKSATRTIASGTIPDPGSLVGSGTTVLDVPVKVAYSIAVSLMKDMCT-----DWDIDYQLDIGLTFDIVVGDITIPVSTQGEIK------ |
3 | 1yycA | 0.10 | 0.07 | 0.71 | 0.99 | DisCoVER | | ---------------------------------------------GHH-H---HHHLEA--SADEKVVEEKAISSLLDKAKGFNIPT--PEATVDDVDFKGV------TRDGVDYHAKVSVKNPYSQSIPICQISYILKSATRTIASGTIPDPGSLVGSGTTVLDVPVKVAYSIAV-SLMKDMC----TDWDIDYQLDIGLTFDIPVVDITIPVSTQGEIKLPSLR- |
4 | 5m45A | 0.06 | 0.04 | 0.70 | 0.67 | DEthreader | | -----NKLFLRAVVRFTGITHVDTAGSM---------YNAHQVSFTSGWVMTQIPSEIAATEFVSAWTALNAN-TS---NW-LQGGAVAEPLVYLGRQIK----------GGCGFESLRMVWNAKDWTMFFMGNGHISWGGGYPAASYDKQAITTEEMFSDDLYLNYMRGGPGFGDPLDREPAVDIGG--------------------------------------- |
5 | 1xo8A | 0.14 | 0.09 | 0.65 | 1.11 | CEthreader | | --------------------------------------------------------------------MASLLDKAKDFVADKLTAIPKPEGSVTDVDLKDVNRD------SVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTALDIPVVVPYSILFNLARDVGVDW-----DIDYELQIGLTIDLPVVEFTIPISSKGEIKLPTFKD |
6 | 6z9cA | 0.10 | 0.08 | 0.80 | 0.77 | EigenThreader | | PKQNGKYETGIFGYDRDVAVLID---ARDCPYAIPGPIQHELFERFLLYD----QTKAPPFRETLRAWQEKNHPWLELS-----------DNIRVTVI-PFYMGMRSHVYWWRYCIRLENL---DSDVVQLRERHWRIFSLSGTETVRGRGVPVLSKEQ--PAFQYSSHVSLQASS------------------GHMWGTFRFERPDHFDVRIPPFSLE----SNKD |
7 | 3butA | 0.07 | 0.04 | 0.51 | 0.73 | HHpred | | -----------------------------------------------------------------------------------------------SLESVKA-WGVTDSQTEI--VALAKVRNEDVVPIVVSGYHYTIE-NGVKVADGYENSPVTVKPASATTLKFSLRLNNSFLREWWVTHIANGE----KTKIRVAIKPTIEI-GRDVEVPVFLRESE------- |
8 | 1xo8A | 0.14 | 0.08 | 0.62 | 1.13 | MRFsearch | | ------------------------------------------------------------------SLLDKAKDFVADKLTA---------IPKPEGSVTDVDLKDV-NRDSVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTALDIPVVVPYSILFNLARDVGV-----DWDIDYELQIGLTIDLVVGEFTIPISSKGEIK------ |
9 | 1yycA | 0.12 | 0.08 | 0.64 | 0.62 | FFAS-3D | | ----------------------------------------------------HHHHHLEASADEKVVEEKASVISSLLDKAKGFFAEKLANIPTPEATVDDVDFKGVTRD-GVDYHAKVSVKNPYSQSIPICQISYILKSATRTIASGTIPDPGSLVGSGTTVLDVPVKV------AYSIAVSLMKDMCTWDIDYQLDIGLTFD----------------------- |
10 | 1yycA | 0.12 | 0.09 | 0.73 | 0.74 | SPARKS-K | | --------------------------------------------------GHHHHHHLEASADEKVVEEKASVISSLLDKAKGFFAIPTPEATVDDVDFKGVT---RDG---VDYHAKVSVKNPYSQSIPICQISYILKSATRTIASGTIPDPGSLVG--SGTTVLDVPVKVA----YSIAVSLMKDMCTWDIDYQLDIGLTFDIVVGDITIPVSTQGEIKLPSLRD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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