>PF07083 (209 residues) EYTIDYQLPVITINNFDQLKTAVEAYANKYQGMAVTASTEKESKSSRAELRKLKQALDDK RKEIRKKYAEPYQRFAAQIKDLEMTLDSSINPIDTGLKELEEQQRQLRLKHVNALIAEMA PNYHVEPGEVEIDPTWLNKTTTKKKVTEGIADVMGYIKKQHDDLKTGISTITKYAQAYHI DPAGWIDQLKQGQDVNYLLQAIDNQVKLN |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
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Seq | EYTIDYQLPVITINNFDQLKTAVEAYANKYQGMAVTASTEKESKSSRAELRKLKQALDDKRKEIRKKYAEPYQRFAAQIKDLEMTLDSSINPIDTGLKELEEQQRQLRLKHVNALIAEMAPNYHVEPGEVEIDPTWLNKTTTKKKVTEGIADVMGYIKKQHDDLKTGISTITKYAQAYHIDPAGWIDQLKQGQDVNYLLQAIDNQVKLN | |||||||||||||||||||
1 | 1cunA | 0.08 | 0.07 | 0.86 | 1.07 | FFAS-3D | --------------DMDDEESWIKEKKLLVSSEDYGRD-LTGVQNLRKKHKRLEAELAAHEPAIQSEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQ---FVANVEEEEAWINEKMTLVA--------SEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMK---GLKGKVSDLEKAAAQ- | |||||||||||||
2 | 4tqlA | 0.10 | 0.05 | 0.54 | 0.78 | DisCoVER | VLARMEKLYMVIQKAIELMRKIFQEVKQEVEKAIMAKMVKKLLEKLKQIMQEAK-NIDDLKKIAEDLIKKAEENIKEAKKIAEQLVKRAKQLIEKAKQVA-------------------------------------IILQLIEKAKEIA----------------------------------------------------------- | |||||||||||||
3 | 3ba6A | 0.04 | 0.03 | 0.81 | 0.83 | DEthreader | TTGAPVIDKILICLVVGM--LD--PPRKEVMGQLCRDAG--I--RVI---MIT-GDNK--------------------G-TAIAICRRIGIFNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGETDPAALNPDLDIMRPRSPEPLISWLFFRYMAIGGYVGAAVGAAAWWFMAEDGIAPEPMTMALSVLEMCN---M--FILYKALD- | |||||||||||||
4 | 5nl6A | 0.09 | 0.09 | 1.00 | 0.59 | CEthreader | FLRATEGMVHDYEQRAQALKENIEAAINKMNGVEPSDEQINETKNYRKGDKRAFIKEQGDLATLFGQINSKLRGMPKSLEGYIANISEAERALRSKLNTAMRNCLIALRKAFADPANATDAKIN-EYRTFVTDETSEAPLEEQVATLKAKLEELKQVEAQLPPIEEAEKACEDANIEDNEYTDVSFDDLQFNYEQTVSMFEKKIVYIEA | |||||||||||||
5 | 5j1iA | 0.10 | 0.10 | 0.99 | 0.93 | EigenThreader | SRCQR---CISELKDIRLQLEACETRTVHRLRLPLDKERIAEQQKAQAEVEGLGKGVARLSAEAEKVLAPTLRSELELTLGKLEQVRSLSAIYLEKLKTISLVIRGTQGAEEVLRLKEAKASLKKLRAQAEAQERWRERVAQLLERWQAVLAQTDVRQRELEQLGRQLRYYRESADPLGQRFAKQYINAIKDYGSESVIQEYVDLRTHY | |||||||||||||
6 | 4kqtA | 0.14 | 0.10 | 0.70 | 0.30 | HHpred | --THGPALPGVCIFSSPRAVGSSLVGKAVDA------RLKTIIQQVNAELTGERTALDNEAKALDAKKTTAQDALEQQAATLANAWQRKGQLRQKEVEATEQKALSRVYQELNTPIQQVYQAQKCS---VLLDREAVL-ANPA-DITDAVVAALDARIK-------------------------------------------------- | |||||||||||||
7 | 6f1tX | 0.13 | 0.11 | 0.83 | 0.40 | MRFsearch | -----------------ALLERNQDMSRQYEQM------HKELTDKLEHLEQEKHELRRRFENREGEWEGRVSELETDVKQLQDELERQQLHLREADREKTRAVQESRASEVERQLSMQVHALK-------------EDFREKNSSTNQHIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQDRVLILERQGHDKDLQ | |||||||||||||
8 | 3pdyA | 0.13 | 0.11 | 0.88 | 1.04 | FFAS-3D | --------------YLQDLLAWVEENQHRVDGAEWGVD-LPSVEAQLGSHRGLHQSIEEFRAKIERARSDERGAYRDCLGRLDLQYAKLLNSSKARLRSLESLHSVAAATKELMWLNEKEEEEV--------GFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLREDHPARPTVESFQAALSWMLQLCCCIEAHLK-- | |||||||||||||
9 | 4tqlA | 0.10 | 0.10 | 0.98 | 0.91 | SPARKS-K | MVQELEKARDRMEKLYKEMVELIQKAIELMRKIKAIEEMKKLYDEAKKKIEQMIQQIKKRAKEEMKKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKKMDDE-LLEKIKKNIDDLKKIAEDLIKKAEENIKEAKKIAEQLVKRAKQLIEKAKQVAEELIKKILQLEKAKEIAEKVLKG---- | |||||||||||||
10 | 4tqlA | 0.14 | 0.11 | 0.84 | 0.74 | CNFpred | ---------------FQEVKQEVEKAIEEMKKLYEAKKKIEQMIQQ-QKMEELLKRAKEEMKKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKE-KMEKLLKEMKQRMEEVKKKM----------------DELLEKIKKNIDDLKKIAEDLIKKAEENIKEAKKIAEQLVKRAKQLIEKAKQVELIKKILQLIEKAKEIA | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |