Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | MKCTLVFQSRFCIFPLTFKSSASPRKFLTNVTGCCFATVTRIPLSNKVLTAVDRSLRCP |
1 | 3fl7A4 | 0.05 | 0.03 | 0.73 | 0.68 | DisCoVER | | AHFPTIAGSDASLATVAGTCVAVVEEPR--------MHC--A-V---DG-EWLVPIGQ- |
2 | 2qryC2 | 0.04 | 0.03 | 0.93 | 0.83 | DEthreader | | KEV--DPRTSTPLGLWQYDA-QAWQKL-AKTVTSVLSYHYLEFPAAAQRQAWISEWAVS |
3 | 6w09A4 | 0.15 | 0.15 | 1.00 | 0.56 | CEthreader | | LSLDYITCEYKTEFASAYRAHTFDNKIVVYKPGQFGDIQSRTPESEDVYANTQLVLQRP |
4 | 2w25A | 0.06 | 0.05 | 0.88 | 0.53 | EigenThreader | | LSAFVAITPDDYVLLVRVASARALEDLLQRIRTTANVRTRSTTF---YS----DRQHIP |
5 | 1lbqA2 | 0.18 | 0.15 | 0.86 | 0.26 | HHpred | | NPYRLVWQSQVG--PKPWLGA-QTAEIAEFLGK--VDGLMFIPIADHIETLIDLGV--- |
6 | 2pffB | 0.16 | 0.14 | 0.86 | 0.60 | MRFsearch | | --CIIRLPQFKATHILDFGPGGSGLGVLTHRTGVRVIVAGTLDINMDLYKTSK------ |
7 | 4nf9A2 | 0.25 | 0.24 | 0.95 | 0.20 | FFAS-3D | | NELRLLFSSAFAKFEITLFLSAYYQNHVGNTSQDIATILSKVPLENNYLKNVVKQI--- |
8 | 3vuoA | 0.12 | 0.12 | 1.00 | 0.63 | SPARKS-K | | CGWEIYFEDNGLVFEIIDSNGNQESVYLSNVNNWYYISISVDRLKDQLLIFINDKNVAN |
9 | 1k1wA | 0.11 | 0.10 | 0.92 | 0.72 | CNFpred | | GKVRIELAAKVWKFPIKTLSQS-EAGWDFIQQGVSYTMLFPIEKELEFTVRFREL---- |
10 | 2iv0A | 0.08 | 0.07 | 0.90 | 0.83 | DEthreader | | AVRPVYYHPEKVNFVVTLVHADNMFQQILRT-----DEYDVILNGDYLSDAAAALIGG- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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