Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | QTDTEVEFTCVTCVPESFAVDIESLEEIRFIFNTDKLYCCLDKTTEECNIPGIGDIEVDVCVVKIVGAIEYILNAYPAVRGDKYGRGEGDIEVIPDREANVCCEGTTFVDNVVGAFAVDDPELIEDPCEELDFCDIEGVLTDISIITDEESDKQCIKFEGRFEL |
1 | 5lvyA | 0.05 | 0.04 | 0.78 | 0.72 | DisCoVER | | YTIDKGDKYINFKLDVPDPRC---KALGGTVYFWGADTRDG---------------KLVMKKGQDKYTLMTTYGGAVQQ---QLGGGYGYYHVSQKPPQTISGVVSKVGYKPGQYTVE---------L-TGFFS-LNDNKQANPTPLKKNI-VSSTGTIT-I-- |
2 | 5b43A2 | 0.07 | 0.04 | 0.62 | 0.67 | DEthreader | | ----------PYTSK-IDPL-------TGFVDPFWTIHFLFFLHYDVKT--------GDFILHFKRNLFQR---------------------------------GLPGMPAWDIVFENNLILLLIMVA-IRSLQSPVRDLNGVCFDSDADGAYHIKWAYQE--- |
3 | 2obdA1 | 0.09 | 0.09 | 0.91 | 0.57 | CEthreader | | VKYGLHNIQISHLSIASSQVELVEAKSIDVSIQ--DVSVVFKGTLKYGYTTAWWLGIDQSIDFEIDSAIDLQINTQLTADSGRV-------------RTDAPDCYLSFHKLLLHLQGEREPGWIKQLFTNFISFTLKLVLKGQICKEINVISNIMADFVQTRAA |
4 | 1s3rA | 0.05 | 0.05 | 1.00 | 0.70 | EigenThreader | | KLKNHKQSISNATSRIFPGKAIPVNRGKTTISVNLPARMQYESISAQQAKFGADGEKQVFIANFRQVYYTASVDPSALFGSGITPTDLINRGVNSKTPPVYVSNVSYGRAMYVKFETTSKSTKLKAGTEYKNTKITAVVLGGNPTSFVKDNSIAIQNNTDYIET |
5 | 2jxmB | 0.12 | 0.09 | 0.71 | 0.27 | HHpred | | ----GLNVGAVLMLPEGFKLAPPEVEEVDTPYSETDEN-ILLAGPLPGE--DY--QEMIFPILAGVYFGKYSIHLGG--NRG---RGQVYPTGELSNNNAFSASIAGTIAAIEGFDVTIQ----PEDGDA-VVTSI---------------------------- |
6 | 5g47A | 0.11 | 0.07 | 0.68 | 0.67 | MRFsearch | | ---QGKISGSPLDI---------TAIRGSFSVNYRGLRLSLSEITAT----------CTGEVTNVSGCYSVSIKLHSS----------------KNSTAHVRCKGD-----ETAFSVLE----------GVHSYTVSLSFDHAVVDEQCQLHESQVTLKGNLIF |
7 | 2jkrM3 | 0.10 | 0.08 | 0.82 | 0.45 | FFAS-3D | | -------------IGEGIKYRRN-----ELFLD------VLESVNLLMSPQGQ------VLSAHVSGRVVMKSYLSGMPENDKIVIETSKSGKQSIAIDDCTFHQCVRLSKLMRYRTTKDIILVPFAPSGLKVRYLKVFEPKLNYSDHDVIKWRYIGRSGIYET |
8 | 6dg5B | 0.05 | 0.05 | 0.98 | 0.63 | SPARKS-K | | AVKNCSHLECFYNSRANVMWSHLNVTTCHVHAKSNL-RHWNKTCELTLVRQASWACNLILLDINVVCRRVKTCDFHPFDNLRLVAPHSLQVLHIDTQRCNISWKVSQVSHYILEFEARRRLL--GHSWEDASVLSLKQRQQWLFLEMLIPSTSYEVQVRVKAQR |
9 | 2uveA | 0.09 | 0.09 | 0.90 | 0.95 | CNFpred | | EPMKGAWLFNNYFRMGAIVTGSHT-WIEDILAENNVMYLTDIGLRAKSTSTGGGARNVTFRNNAMRDLQVMVMTLDYAD-------SNANIDYPPKIPAQFY---DFTLKNVTVDNSTGKNPSIEIKGDKAWHRLVH--VNNVQLNNVT---PTAISDLRDSEF |
10 | 3dwoX | 0.12 | 0.09 | 0.78 | 0.67 | DEthreader | | -------GFMVPTTSAAFPGSLS---AGVIIQRT--S-GFVSQNLDASASPGMGGIFASSALMRVKVDNTSPGFFAGAVWK---------------GFAYHAK---N-L--HYNLYDDLTEGAIEGLRMGAS-ASARL-DIPAYASLDWLGASATWTEWSFLTL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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