>PF07010 (264 residues) MALLQGTVLVLLLSSLGGGQDNTDVINIATPRVSSSNSTTQTSVSTPNTTLAPNLEKSTR GTSPQGTTNSESAKTTLMSTAPSLTTVKSEGTTSNGVPKNESVTANDTVTNLPPISAVST LKSSQHKTENQSSSKTTEIIVSTVNTSQPDGPFSETNTLPSAAVTTPAIILQSQGTEDGK NMSSSSTNPSYSSVILPVVIALIVVTLSVFVLVGLYRMCWKTDPGTPENGNDQPQSDKES VKLLTVKTISHESGEHSAQGKAKN |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MALLQGTVLVLLLSSLGGGQDNTDVINIATPRVSSSNSTTQTSVSTPNTTLAPNLEKSTRGTSPQGTTNSESAKTTLMSTAPSLTTVKSEGTTSNGVPKNESVTANDTVTNLPPISAVSTLKSSQHKTENQSSSKTTEIIVSTVNTSQPDGPFSETNTLPSAAVTTPAIILQSQGTEDGKNMSSSSTNPSYSSVILPVVIALIVVTLSVFVLVGLYRMCWKTDPGTPENGNDQPQSDKESVKLLTVKTISHESGEHSAQGKAKN | |||||||||||||||||||
1 | 5kyhA | 0.07 | 0.06 | 0.76 | 0.59 | DisCoVER | ------NVAGTQ-VTGKSLTLIQATW--ARPATNVGTTISKDSFDRSK--------AVLILSFQ-PPAVLQGGQAITIDAIDVL---------YQGRVVCHYDSFPMTADDYHI-GQTIGGLTAFGLVFPFATILAGTWEVNYV---STNYVETNFR-NTSAVIKFDRFVNTHYSPDTQNNNGV---PIF-DVASASQSNF--AV--VI--W--------------C-PNVNPNVM-QSVDVKMVFSDTWEASVPLSI------ | |||||||||||||
2 | 3ikmD | 0.05 | 0.04 | 0.69 | 0.67 | DEthreader | RFLDSMHMAISGLSSFQRWIAAKWDWLDISFLECPHPVT-AG-------------------------------D-DTRTAVDSELWAFGMTLQGRKSRGT-------HSKTREHAKIFNYGRIGGMTKSDEGEWVRELNL-------------PVDRTESLQLRKVQ-RETARKSQW---KKWE-VVAERWEFMTSRVNWVVQSSAVDYLHLMLVAMKWLFRAALAQILQVAFFAVDILRK----------------------- | |||||||||||||
3 | 1vt4I3 | 0.06 | 0.06 | 1.00 | 0.59 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 4u1dC | 0.06 | 0.06 | 0.97 | 0.52 | EigenThreader | GEKQAALQSLHDFITAIRWATPSTVEPVVFKFLEIGVELKK---------GKLLKDGLHQYKKLIQGSTEGLVSVGAVARKFIDLVESKIASEITSWLRFTWESYRAVLDLLRNNALLEITYSGVVKKTMHFCLKYQRLQRYLDQRFQQVDSIEDVFHLMKISKRAPKPSTLANYYENLVKVFFVSGDPLLHTTAWKKFYKLYSEEFKTYSSTIFLSAISTQLDPTRKEMLQSIIEDESIYGKVDVSQSELYKLATLPAPLDLS | |||||||||||||
5 | 6bmsA | 0.22 | 0.05 | 0.24 | 0.46 | HHpred | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NNLERVTYLLIFHVCFIMFCWTYWKAIFTPPSTPTKKFHLSYTDKERYRPEVQKQTRAQSGAI-------- | |||||||||||||
6 | 6navA | 0.17 | 0.03 | 0.17 | 0.42 | MRFsearch | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAVTALILVIASVIIALVVVGFAFGLFGAFT----------------GQGTVTQVGTATLSA------------- | |||||||||||||
7 | 4f4cA1 | 0.20 | 0.04 | 0.21 | 0.43 | FFAS-3D | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------NNGSTFLPTGQNYTKTDFEHDVMNVVWSYAAMTSVLYLLNTCAYRMGLTDPPTM-----QP------------------------------ | |||||||||||||
8 | 5yfpD | 0.06 | 0.06 | 0.99 | 0.99 | SPARKS-K | HNIFKTALDFQRLFYNLLNVFNT-ANTFREKISYCILDLLNHFYNYYLGLFNSLIG--TSDRHLTRKIITAWLQNGILMDQEQKILNGDETLFHEESIELFKEIPHFYQAGKGLSDLFNNLTLDTILQFSASVKKAINIDEVSQEPMLDADRLRSSWTFSESMDLNYSNPSSSPNSLGNLKILLDDKASKKFDETIDGFKTLKFKLITILRFNIRALCIYDIGSFFQNTKIWNMDVGSIELDQNIASLISELRRTESKLKQQLP | |||||||||||||
9 | 5htkA | 0.11 | 0.02 | 0.20 | 0.41 | CNFpred | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EPVIMELERQNVLVISHQAVMRCLLAYFLDK------GADELPYLRCPLHTIFKLTPVA-------------- | |||||||||||||
10 | 6fb3A | 0.04 | 0.03 | 0.77 | 0.67 | DEthreader | -------DAPGHEEIIKLIYLSSRTAGDKTDASDA-IDPVSGSLYVSDTNSRGEQCLFDEARDGISTLLMDVNSLYRTIGVLYISETEKINRLRQVTNGEICLLAGAASDCD---DVNCNCY--LNSPSS--L---A-V--A-----------------------P-DG-TIYIADIRAVSKNRPIYEAYHYTLLYNMDSNGNYFNGRLAGRTDISRMFADGKVWLQSQRQYIP---P---LHASIR--------KGISSIA-- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |