Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | MALLQGTVLVLLLSSLGGGQDNTDVINIATPRVSSSNSTTQTSVSTPNTTLAPNLEKSTRGTSPQGTTNSESAKTTLMSTAPSLTTVKSEGTTSNGVPKNESVTANDTVTNLPPISAVSTLKSSQHKTENQSSSKTTEIIVSTVNTSQPDGPFSETNTLPSAAVTTPAIILQSQGTEDGKNMSSSSTNPSYSSVILPVVIALIVVTLSVFVLVGLYRMCWKTDPGTPENGNDQPQSDKESVKLLTVKTISHESGEHSAQGKAKN |
1 | 5kyhA | 0.07 | 0.06 | 0.76 | 0.59 | DisCoVER | | ------NVAGTQ-VTGKSLTLIQATW--ARPATNVGTTISKDSFDRSK--------AVLILSFQ-PPAVLQGGQAITIDAIDVL---------YQGRVVCHYDSFPMTADDYHI-GQTIGGLTAFGLVFPFATILAGTWEVNYV---STNYVETNFR-NTSAVIKFDRFVNTHYSPDTQNNNGV---PIF-DVASASQSNF--AV--VI--W--------------C-PNVNPNVM-QSVDVKMVFSDTWEASVPLSI------ |
2 | 3ikmD | 0.05 | 0.04 | 0.69 | 0.67 | DEthreader | | RFLDSMHMAISGLSSFQRWIAAKWDWLDISFLECPHPVT-AG-------------------------------D-DTRTAVDSELWAFGMTLQGRKSRGT-------HSKTREHAKIFNYGRIGGMTKSDEGEWVRELNL-------------PVDRTESLQLRKVQ-RETARKSQW---KKWE-VVAERWEFMTSRVNWVVQSSAVDYLHLMLVAMKWLFRAALAQILQVAFFAVDILRK----------------------- |
3 | 1vt4I3 | 0.06 | 0.06 | 1.00 | 0.59 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 4u1dC | 0.06 | 0.06 | 0.97 | 0.52 | EigenThreader | | GEKQAALQSLHDFITAIRWATPSTVEPVVFKFLEIGVELKK---------GKLLKDGLHQYKKLIQGSTEGLVSVGAVARKFIDLVESKIASEITSWLRFTWESYRAVLDLLRNNALLEITYSGVVKKTMHFCLKYQRLQRYLDQRFQQVDSIEDVFHLMKISKRAPKPSTLANYYENLVKVFFVSGDPLLHTTAWKKFYKLYSEEFKTYSSTIFLSAISTQLDPTRKEMLQSIIEDESIYGKVDVSQSELYKLATLPAPLDLS |
5 | 6bmsA | 0.22 | 0.05 | 0.24 | 0.46 | HHpred | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NNLERVTYLLIFHVCFIMFCWTYWKAIFTPPSTPTKKFHLSYTDKERYRPEVQKQTRAQSGAI-------- |
6 | 6navA | 0.17 | 0.03 | 0.17 | 0.42 | MRFsearch | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAVTALILVIASVIIALVVVGFAFGLFGAFT----------------GQGTVTQVGTATLSA------------- |
7 | 4f4cA1 | 0.20 | 0.04 | 0.21 | 0.43 | FFAS-3D | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------NNGSTFLPTGQNYTKTDFEHDVMNVVWSYAAMTSVLYLLNTCAYRMGLTDPPTM-----QP------------------------------ |
8 | 5yfpD | 0.06 | 0.06 | 0.99 | 0.99 | SPARKS-K | | HNIFKTALDFQRLFYNLLNVFNT-ANTFREKISYCILDLLNHFYNYYLGLFNSLIG--TSDRHLTRKIITAWLQNGILMDQEQKILNGDETLFHEESIELFKEIPHFYQAGKGLSDLFNNLTLDTILQFSASVKKAINIDEVSQEPMLDADRLRSSWTFSESMDLNYSNPSSSPNSLGNLKILLDDKASKKFDETIDGFKTLKFKLITILRFNIRALCIYDIGSFFQNTKIWNMDVGSIELDQNIASLISELRRTESKLKQQLP |
9 | 5htkA | 0.11 | 0.02 | 0.20 | 0.41 | CNFpred | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EPVIMELERQNVLVISHQAVMRCLLAYFLDK------GADELPYLRCPLHTIFKLTPVA-------------- |
10 | 6fb3A | 0.04 | 0.03 | 0.77 | 0.67 | DEthreader | | -------DAPGHEEIIKLIYLSSRTAGDKTDASDA-IDPVSGSLYVSDTNSRGEQCLFDEARDGISTLLMDVNSLYRTIGVLYISETEKINRLRQVTNGEICLLAGAASDCD---DVNCNCY--LNSPSS--L---A-V--A-----------------------P-DG-TIYIADIRAVSKNRPIYEAYHYTLLYNMDSNGNYFNGRLAGRTDISRMFADGKVWLQSQRQYIP---P---LHASIR--------KGISSIA-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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