Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | LNLDVTAMLAYVSGLTNGRCNFKFKEPVLTQQAEWERAKPVKPVLDQLFEGKSLFCCESAVKDFQSIVSTLGGPGEVSRANELLARITVIPDMTSLRAQAQLKLGGKIKQRSLAVFGTGDAVRAVTVSANAGFVRAAKCQGVEFAVFVHESRALTEGKEHDAR |
1 | 2h1cA | 0.15 | 0.11 | 0.76 | 1.00 | DEthreader | | ILLDTNVISEP-LRPQP------------------N--ERVVAWLDS-LILEDVYLSAITVAELRLGVALLNKNVLHERLESILPLFRILPFDVAAIYAQIRYAKKEIAAADGYIAATAKQHSLTVATRDTGSFFAA----DVA-VFNPWH------------ |
2 | 2h1cA | 0.15 | 0.12 | 0.76 | 1.00 | DEthreader | | ILLDTNVISEP-LRPQ----------------P--N--ERVVAWLDSLILEDVYLS-AITVAELRLGVALNKKNVLHERLESILPLFRILPFDVAAIYAQIRYAKKEIAAADGYIAATAKQHSLTVATRDTGSFFAAD-----VAVFNPWH------------ |
3 | 4xgqA | 0.11 | 0.08 | 0.74 | 1.11 | MAPalign | | MVIDTSALVAMLS------------------------DEPDAERFEAAVEADIRLMSTASYLETALVIEARFGEPGGRELDLWLAAVDLVAVQAARAAYRTYGKRAGLNYGDCFSYGLAKISGQPLLFKGEDFQ-HT----D-IATVALP------------- |
4 | 3tndA | 0.09 | 0.07 | 0.75 | 1.16 | CEthreader | | FMLDTNICIFTIKNK------------------------PASVRERFNLNQGKMCISSVTLMELIYGAEKSMPERNLAVIEGFVSRIDVLDYDHTGQIRAELARQRPVGPFDQMIAGHARSRGLIIVTNNTREFERVG----GLRTEDWS------------- |
5 | 5k8jB | 0.16 | 0.12 | 0.72 | 1.00 | DEthreader | | YVLDTNVAIHLRDG-DP----------------------EVTTRVTALN-GA-ILLSIISRVELEGGVYREQAGLRRSRLDV-LKVLPVLDFDAADEYRRIVAGYSRRKVVDR-IAAQALAHRATFVTFNADDFRDI----PGLSLLAW-------------- |
6 | 5k8jB | 0.18 | 0.13 | 0.72 | 1.00 | DEthreader | | YVLDTNVAIHLRDG-DP----------------------EVTTRVTAL-NGAILLS-IISRVELEGGVYREQAGLRRSRLDV-LKLPVLDFDGAADEYRRIVSAGYSRKVVDR-IAAQALAHRATFVTFNADDFRDI--P-G-LSLLAW-------------- |
7 | 3h87B | 0.14 | 0.10 | 0.76 | 0.42 | HHpred | | WLIDKSALVRLTDS-------------------------PDMEIWSNRIERGLVHITGVTRLEVG---FSAECGEIARREFRPLSAMPVEYLTPRDRAQADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIAALTGQKTERLTHRPP----------- |
8 | 3h87B | 0.11 | 0.08 | 0.74 | 0.81 | DisCoVER | | WLIDKSALVRLT-------------------D--SP----DMEIWSNRIERGLVHITGVTRLEVGFSA---ECGEIARREFPPLSAMPVEYLTIEDRALEVQTLLRGPSIPDLLIAATAELG-LTVLHVDKDF-DAIAAL-TGQKTE-R-L-THR-------- |
9 | 5sv2A | 0.13 | 0.10 | 0.74 | 0.50 | MRFsearch | | -LLAKSAAYRAHLP-------------------------AVRHRLEPLMERGLLARCGITDLEFGVSARS---REDHRTLGTYRRALEYVNTPDTQEALTDKGFHRSVKIPDLIIAAVAEHHGIPVMHYDQDFERIAAITRQPVEWVVA-------------- |
10 | 6wvsA | 0.15 | 0.13 | 0.88 | 0.67 | SPARKS-K | | -------------DILIVNAT---DVDEMLKQVEILRRLGAWRILQEALKGGDILIVNEMLKQVEILRRL-GAKQDWRILQEALKKILIVNATDVDEMLKQVEILRRLGAKQIAVVSDDWRGDILIVNAMLKQVEILRRLGAQIAVVSDDWRILQEALKK--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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