Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | VNDARKQINVTVSYDSTYRKMAFPMGDVPQHTGVCTDVVIRAYRQQQIDLQKLVHQDMKKAWVSYPKIWGLKTTDTNIDHRRVPNLETFFKRHGKSLSLTDLSSFKAGDIVTWRLPRNLPHIGIVSDKKNKEGIPLIIHNIGQGTQEEDILFKYKMIGHYRY |
1 | 2p1gB | 0.15 | 0.13 | 0.88 | 1.17 | DEthreader | | LSNGLGFVDTPYKAGTLEVDTED--LIINCDEVDCTTFVEYALAMALCNLQRIRYRDGK--------------DGYTSRLHYISDWINNAVRGLEDVTSLLGLWIKNGDIIALTTNTLVSHMGIAIY-IK--GQLHLLHASSGKVVVGALSLKLTGIRVLRM |
2 | 2p1gB | 0.15 | 0.14 | 0.88 | 1.17 | DEthreader | | LSNGLGFVDT-PYKAGTLEVDTEDLIINCD-EVDCTTFVEYALAMACFNLQRIRYRDGK--------------DGYTSRLHYISDWINNAVRGLEDVTYSGLPWIKNGDIIALTTNTLDVHMGIAIYI-KG--QLHLLHASSGKVVVGALSLKLTGIRVLRM |
3 | 4fdyA | 0.15 | 0.10 | 0.70 | 1.46 | HHpred | | ---DDETVQ-VIDEALKYEGFPYVFGGASPTTSFDSGLIQWVYDKAGISLPRV------------------------------A-QDQY--DATQEIS----EEAQAGDLIFFHSTYYVTHVAIYLEG----N--RFYHAG-DPIGYGDLSSRWHLIGARRV |
4 | 6istC1 | 0.14 | 0.10 | 0.73 | 0.87 | DisCoVER | | LSYVNGLV-GKGVD------------ADGWYGTQCMDLTVDVMQRFFGWR---------------------------P-YGNAIALV-DQPLPFQRIRTTSSTQIKAGDVMIWGLYAQYGHTGIATEDGRADGTFVSVDQNGSPAAAIHHNMD-GVWGVIR- |
5 | 4fdyA2 | 0.16 | 0.11 | 0.69 | 0.67 | MRFsearch | | --ETVQVID----EALKYEGFPYVFGGASPTTSFDSGLIQWVYDKAGISLPR---------------------------------VAQDQYDATQEISE----EAQAGDLIFFHSTTYVTHVAIYLE------GNRFYHAG-DPIGYGDLSSRDHLIGARRV |
6 | 6b8cA | 0.17 | 0.12 | 0.70 | 1.38 | SPARKS-K | | GAAIVAEAYK-------YIGTPYVWGGKDPSGFDCSGFTRYVYLQVTG----------------------RDIGGWTVP----------QESAGTKISV---SQAKAGDLLFWGSPGGTYHVAIALGGGQ------YIHAPGESVKVGSV-QWFAPDFAVSM |
7 | 2p1gB | 0.15 | 0.13 | 0.89 | 1.16 | MAPalign | | LSNGLGFV--DTPYKAGTLEVTEDLIIN-CDEVDCTTFVEYALAMADFANLQRIR--Y------RDGKIDGYTS----RLHYISDWINNAVRLLEDVTLDGLPWIKNGDIIALTTNGLDVHMGIAIYI---KGQLHLLHASSGKVVVGALLKSLTGIRVLRM |
8 | 6istC | 0.16 | 0.12 | 0.75 | 1.11 | CEthreader | | LSYVNGLVGKGVDADGWY-------------GTQCMDLTVDVMQRFFGWRP----------------------------YGNAIALVDPLPAGFQRIRTTSSTQIKAGDVMIWGLGAQYGHTGIATEDGRADGTFVSVDQNWINPAAAIHHNMDGVWGVIRP |
9 | 6istC1 | 0.16 | 0.12 | 0.73 | 0.89 | MUSTER | | LSYVNGLVGKGVDADGWY------GTQ-------CMDLTVDVMQRFFWRP------------YGNAIALVDQPLPAGF----------------QRIRTTSSTQIKAGDVMIWGLYAQYGHTGIATEDGRADGTFVSVD-VGSPAAAIHHNMD-GVWGVIRP |
10 | 2hbwA | 0.16 | 0.12 | 0.72 | 2.27 | HHsearch | | ESEIKKLLPGAIAFTQKA-QQSYLGGTVG--PNYCSGL-QAAFVSVGIWLPRDA------------------------------YQQE---AFTQAITI---DELAPGDLVFFGTPVKATHVGLYLGD------GCYIHSSQGGIGIDILSESYQLRGAGRV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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