Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MKLRTHYVFSTGLLTFLDSVLFHEYFYYALILSGIVSVIGNSLIDRIGHKEIATRYGYIPVRTPLTHTIPRSVVWGIVSIIPVFILLLIYYGFSYHEYYFSLSNKVLMLILLNGVVVGPSHMLL |
1 | 4jr8A | 0.06 | 0.06 | 0.92 | 1.00 | DEthreader | | IYWARYSDWLFTTPLLLYDLGLLAGADRNTISLVSLDVLMIGTGVATLSAGSGV------SAG--ERL-VWW-GISTAFLLVLLYFLFSSLSGRVLPDTRSTFKTLRNLVTVVWLVYPVWWLGE |
2 | 5xamA | 0.09 | 0.08 | 0.87 | 1.00 | DEthreader | | FIMGLGSIIAAIHDVAIAMGLFFSVLLTLIGYSLNDSIIVSDRIRE-NMKTM--------HSYREIVN--AAINQTLSRTVMTSVSTML-P---LISLLIRSL-ILLVGILVGTYSSIYIVAPV |
3 | 5ezmA3 | 0.01 | 0.01 | 0.71 | 0.55 | DisCoVER | | -------------------SPRSWGLIGMAIVAACGLLASP--VV--ATLNA-----NHIPNSFYRA-Y-AVW-VAVAFVVMLLGIAVA---RLLLRRGVLP-SVAVYAMGMYLGFTVALGTV- |
4 | 4he8L | 0.05 | 0.05 | 0.94 | 1.00 | DEthreader | | TDIKKIVAYSTISQLGYMFLAAGGAWVALFHVTHAFFKALLFLASGSVIHALG------E-DVKMGGLWRWALIGALALGGSGFWSKDAILAALTYPFGGVGFYVGALLVAVLTAMYAMRWFLV |
5 | 6ajfA | 0.14 | 0.13 | 0.94 | 0.57 | CEthreader | | VIAAALPAIIGGLAIAGALGIMRLAQPVVTLIGLGIAIDYGLFIVSRFREEIAEGYDTEAAVRRTVMTSGRTVVFSAVIIVASSVPLLLFPQ--------GFLKSITYAIIASVMLAAILSITV |
6 | 6n3tA4 | 0.06 | 0.06 | 0.93 | 0.75 | EigenThreader | | IKAALMSALTLGSTMGILTWMFAPMIGLIIAVIWGLSTDYEVFLVSRMVEARERGMSAEAIRIGTATTGRLITGAALILAVVAGAFVF---------SDLVMMKYLAFGLLIALLLDATIIRMF |
7 | 4he8L2 | 0.11 | 0.10 | 0.85 | 0.26 | HHpred | | ------MFLAAGVGAYWVALFH---VFTHAFFKALLFLASGSVIHALGGEQDVRKMGGLWKHLPQTRWHALIGALA-LGGLPLLSGFWILAAT-LTYP--FGGVGFYVGALLVAVLTAM----- |
8 | 7jm6A | 0.11 | 0.11 | 0.98 | 0.27 | MRFsearch | | --TEKRDFVSAGAAAGVSAAFGQFLTWRIFFASMISTFTLNSVLSVYHGNAWDLSSPGLINFGYTIQEIPIFIFMGVVGGILGALFNALNYWLTMFRIRYHRPCLQVIEAMLVAAVTAAVGFVM |
9 | 5lnkN1 | 0.10 | 0.09 | 0.90 | 0.58 | FFAS-3D | | MNPIILIIILMTVMLGTIIVMISTHWLLIWIGFEMNMLAIIPIMMKKHNPRA-------------TEASTKYFLTQSTASMLLMMAIIINLMFSGQWTVMKLFNPMASMLMTMALAMKPFHFWV |
10 | 6vejA2 | 0.05 | 0.05 | 0.98 | 0.86 | SPARKS-K | | VVACSIPLVLAMVFVFMEYTDITMQRVSLGALIIALGLLVDDAMITVEMMITRLELGDSLHD-SATYAYTSTAFPMLTGTLVTVAGFVPIGLNAS--SAGEYTFTLFAVIAVALLLSWIVAVLF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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