>PF06918 (218 residues) KKSRKDRCERVVEAIEGLVGAKNLDRFLTDFVHFIAASEKFSFALALSPWDSFFCTIRWK LSNKFIKEFKDYLNSKLGFDVFSSRQEIDKIRKNHAPLDDYNINIETTTRCTRKGFEAKV PMAVVSAKNVKNLVERRFQSLQNNSRLQFEYDDEVALGFGGDKGADVTKLCIVFQNIASP NNPHGILLVGYYTGDDNYANLKSKMRTVFEQVNNIKSI |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | KKSRKDRCERVVEAIEGLVGAKNLDRFLTDFVHFIAASEKFSFALALSPWDSFFCTIRWKLSNKFIKEFKDYLNSKLGFDVFSSRQEIDKIRKNHAPLDDYNINIETTTRCTRKGFEAKVPMAVVSAKNVKNLVERRFQSLQNNSRLQFEYDDEVALGFGGDKGADVTKLCIVFQNIASPNNPHGILLVGYYTGDDNYANLKSKMRTVFEQVNNIKSI | |||||||||||||||||||
1 | 6pqnA | 0.10 | 0.07 | 0.72 | 1.20 | HHpred | -------------------------------------------STIFSPEKALGLLLSLKLSKWQYITLRETTIREGSKEIYPSYYKVQKAKLQCYPPKFVAV--T------DSS-------AKI---ALQALLDLTVNRIFETRSPDINKQLILISKWGFDGQNIESGVGDTVWVNPKPCSPMYCRPVQFSFVKETKDVVINEKTAMDDEIEALVPS | |||||||||||||
2 | 4wwxB | 0.09 | 0.09 | 1.00 | 1.03 | MAPalign | RRAQKHRLRELKIQVKEFAEGGDVKAVCLLFLLALRARNEHQAGSGLQPAVCLAIRVNTFLSCSQYHKMYRTVKAITGRQIFQPLHALRNAEKVLLPGYHTDVGIIDGLLASSVDEYVIAKRFRSALVSALMDMEEDILEGMRSQDLDDNGPFTVVVKESCDGMGKAVRFSFTVMRIEHVKVFEECKPLCLMLADEDHETLTAILSPLIAERELTLEM | |||||||||||||
3 | 4wwxB | 0.11 | 0.11 | 1.00 | 1.18 | CEthreader | QKHRLRELKIQVKEFADKEEGGDVKAVCLTLFLLALRARNEHRQADLQPAVCLAIRVNTFLSCSQYHKMYRTVKAITGRQIFQPLHALRNAEKVLLPGYHTDVGIIDGLSGLASSVDEYPVDTIAKRFRYDSALVSALMDMEEDLDDYLNGPFTVVVKESCDGMGDVVRFSFTVMRITKPNSELCCKPLCLMLADEDHETLTAILSPLIAEREAMKSS | |||||||||||||
4 | 6pqnA | 0.10 | 0.07 | 0.72 | 1.74 | HHsearch | -------------------------------------------STIFSPEKALGLLLSLKLSKWQYITLRETTIREGSKEIYPSYYKVQKAKLQCYPPKFVAV--T------DSS-------AKI---ALQALLDLTVNRIFETRSPDANKQLILISKWGFDGQNIESGVGDTVWVNPKPCSPMYCRPVQFSFVKETKDVVINEKTAMDDEIEALVPS | |||||||||||||
5 | 4wwxB1 | 0.09 | 0.09 | 1.00 | 1.03 | MAPalign | RRAQKHRLRELKIQVKEFAEGGDVKAVCLLFLLALRARNEHQAGSGLQPAVCLAIRVNTFLSCSQYHKMYRTVKAITGRQIFQPLHALRNAEKVLLPGYHTDVGIIDGLLASSVDEYVIAKRFRSALVSALMDMEEDILEGMRSQDLDDNGPFTVVVKESCDGMEKAVRFSFTVMRIEHVKVFEECKPLCLMLADEDHETLTAILSPLIAERELTLEM | |||||||||||||
6 | 6b40A | 0.13 | 0.11 | 0.79 | 1.66 | HHsearch | --------------------------------------------SCMTPEECLGMRLDMLMTKNQYSKEYNILKER-GFSTLCPPKQLDAIEKTLMPGTRYSLEPDSTMDFHEYVPDFPCPNTKGVRFPYAHAVAKTLEELEDENGLKRDPNIHTICKDGADGMGDVLRFSFCVLRDPNPNSVRSNRPVLECIDENDDGTVAVCVGPIECQRLLMKDK | |||||||||||||
7 | 5mz61 | 0.08 | 0.07 | 0.86 | 0.83 | DEthreader | GFEQTAELQQEISEFI-GVNGPIDSSKLARITSYYASFFFVLTTNTLYYSSII-EE--A-G---SE-KNAKLMRV-SCVSIHDFRWTKDLERCRFAWTVQIAALMFLLEMIYPGIFRRV-MLQFCWEVGRQVSSTFSQLE-A----MKSQEKQLNAISLLMGC----GSVAILD-------YAMAKCIVGCLW-TVTDEYLTGAAV-VM-YGLPVVA- | |||||||||||||
8 | 4wwxB1 | 0.10 | 0.07 | 0.74 | 0.83 | DEthreader | NEHR--DE--------------------------EAIMQGR-G-SGL---QPAVCLAIRLSCSQYHKMYRTVKAI-TGRQIFQ-P--LHALRNAEKGYDVGIID-------------------AKRF-RYDSALVSALMDMEEDILEGMSQPFTVVVKESCDGMGKAVRFSFTVMREEPPNSELCCKPLCLMADESDHETLTAILSPLIAEREAMKEL | |||||||||||||
9 | 4wwxB1 | 0.10 | 0.10 | 0.97 | 0.80 | HHpred | RRAQKHRLRELKIQVKEFAEGGDVKALFLLALRARNEHRQQGRGSGLQPAVCLAIRVNTFLSCSQYHKMYRTVKAITGRQIFQPLHALRNAEKVLLPGYPFEWQ--PPL-KNVSGLEYPVDTIAKRLMDMEEDILEGM---RSQDLDDYLNGFTVVVKESCDGMGDAVRFSFTVMREPKPNSELCCKPLCLMLADSDHETLTAILSPLIAEREAMKSS | |||||||||||||
10 | 4wwxB1 | 0.08 | 0.07 | 0.90 | 0.75 | DisCoVER | ---------QVKEFADKEEGG-DVKAV--LFLLALRARNEHQAGSGLQPAVCLAIRVNTFLSCSQYHKMYRTVKAITGRQIFQPLHALRNA-----EKVLLPGYHPFEWQPPLKNVSSRTDVGSAVSAMDMEEDI--LEGMRSQ-DDYLNGPFTVVVKESCDGMGKAVRFSFTVMITIEVFEELCCKPLCLMLADERFRKMNEMEDVLKHHWLTSKY- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |