>PF06912 (201 residues) LGILLAIVGGFLDAYTYISRGEVFANAQTGNIVLLGLNIAEGNFKNSIYYLIPILSFALG VVISEVIKSKYKDSNHIHWRQIIIVIEIIILFIVGFVPSGNMNVIVNVAISFVCSMQVES FRKVHGNAFATTMCTGNLRSGTEQLYKYKKTKDKSMLHRTLQYYGIILFFILGAAIGALV TKLFNEKSVLFCCIILLVAFA |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | LGILLAIVGGFLDAYTYISRGEVFANAQTGNIVLLGLNIAEGNFKNSIYYLIPILSFALGVVISEVIKSKYKDSNHIHWRQIIIVIEIIILFIVGFVPSGNMNVIVNVAISFVCSMQVESFRKVHGNAFATTMCTGNLRSGTEQLYKYKKTKDKSMLHRTLQYYGIILFFILGAAIGALVTKLFNEKSVLFCCIILLVAFA | |||||||||||||||||||
1 | 6w4sF | 0.07 | 0.05 | 0.78 | 1.00 | DEthreader | YLSLSTWGDRMWHFAVSVF-LVE-----------------GNSLLLTAVYGLVAGSVLVLGAIIGDWVDKN---ARLKVAQTSLVVQNVSVILCGIILVCYLIITIANIANLASTATAITIQRDWIVVV-----------------------RSKLANMNATIRRIDQLTNILAPMAVGIMTGIGCGFISGWNVSMCVEYV | |||||||||||||
2 | 6w4sF | 0.08 | 0.06 | 0.76 | 1.00 | DEthreader | LHSLSTWGDRMWHFAVSV-FLVEL-------------Y----G-NSLLLTAVYGLVVAGSVLLGAIIGDWVDKNARLKVAQTSLVVQNVSVILCGIIMVLTCYILIITIANIANLASTATAITIQRDWI--------------------------A--NA-IRRIDQLTNILAPMAVGQIMTGSICGFISGWNLVSMCEYV | |||||||||||||
3 | 5aymA | 0.08 | 0.07 | 0.84 | 0.29 | HHpred | ---------------TQLLL-GRLLTRSGDQAWDFVLVIFPGKLQVAFYYLIVKIGTFLLTPSSGKWIDTHPR---IQVVKWGVWLQFFAILAGMVFDRESWLLSVLFIALALSGVMASLGSQI-----TDIS---VGNDLA---PSLV-APEKLTHFNSWLRRIDLATEVGAPILAGALFPLAGLFLIGWNLVSFVPEY- | |||||||||||||
4 | 6m2lA1 | 0.14 | 0.09 | 0.64 | 0.58 | DisCoVER | YVCIASFIFGYQVSVLNT-SSFLSVFI----------------------------GAVLGCGFSGYLV-------QFGRRLSLLIIYN-FFFLVSILTSITTILFARLLSGFGIGLVTVSVPMYISMTYGMHQL----------------------------------FITFGIFVAVMLGLSFARLMFLFPSVISLIGI- | |||||||||||||
5 | 6t1zA | 0.15 | 0.12 | 0.85 | 0.22 | MRFsearch | --LQLRLGIVFLGAFSYGT---------VFSSMTIYYNQYLGSAITGILLALSAVATFVAGILAGFFADRNG---RKPVMVFGTIIQLLGAALAIASNLPHVNPWSTFIAFLLISFGYN-----------------FVITAGNAMIIDASNAENRKVVFMLDYWAQNLSVILGAALGAWLFRPAFEALLVILLLTVLVSFF | |||||||||||||
6 | 6thaA | 0.08 | 0.06 | 0.86 | 0.96 | SPARKS-K | QPILIAVVLQLSQQL----------SGINAVFYYSTSIFEKAGVQPVYATIGSGIVNTAFTVVSLFVVERAG---RRTLHLIGLAGMAGCAILMTIALALPWMSYLSIVAIFGFVAFFEVG----------------PGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLCGPYVFIIFTVLLVLFFI | |||||||||||||
7 | 6h7dA | 0.10 | 0.08 | 0.83 | 0.82 | MAPalign | VAAMGGLLFGYDLGISGGVTSMELTFFPQVESQMAYCKF--DNQMLQLFTSSLYLAALVASFMASVITRK-------HGRKVSMFIGGLAFLIGALFANVSMLIIGRLLLGVGVGFANQSTPVY---------------LSEMA----------PAKIRGALNIGFQMAITIGILVANLINYGTSLGLAAVPAVVMVIGS- | |||||||||||||
8 | 6gs1A1 | 0.08 | 0.06 | 0.82 | 0.49 | CEthreader | IELWERFGYYGLQGIMAVYLVKQL---------------GMSEADSITLFSSFSALVYGLVAIGGWLGDKV--LGTKRVIMLGAIVLAIGYALVAWSGHDAGVYMGMAAIAVGNGLFKAN-------------------PSSLLSTCYEKNDPRLDGAFTMYYMSVNIGSFFSMIATPWLAAKYGWSVAFALSVVGLLITI | |||||||||||||
9 | 3wdoA | 0.11 | 0.09 | 0.89 | 0.67 | MUSTER | FSKVLAEPRLLKLNFGIM----CLHMLLMSTFVALPGQLADAGFPAAEHWKVYLATMLIAFGSVVPFIIYAEVKRKMKQVFVFCVGLIVVAEIVLWNAQTQFWQLVVGVQLFFVAFNLMEALLP-----------SLISKES--------PAGYKGTAMGVYSTSQFLGVAIGGSLGGWIDGMFDQGVFLAGAMLAAVWLA | |||||||||||||
10 | 4ldsA | 0.16 | 0.15 | 0.93 | 0.71 | HHsearch | LIFILGALGGLLYGYDNGVISGALL--------FIHKDIPLNSTTEGIVVSSMLIGAIVGAGSSGPLADKLGR----RRLVLIAIVFIIGALILAYLSEEIEGWRWMLGLAVVPSVILLVGI-YFMPESPRWLLENRNEEAARQVMKITYDKSPW-LGRILIVGCIGTINVLVTIVAIFVVDKIDRKKLLVGLSLFIVFFG | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |