Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | RCAETLATSGLGYTVQADSPASATCPLSNVVRVQDAPVRLSSSFLATCPVAVAFALFERHGLQPAAQRVFGQPVVQVDHLGSYACRNMYNRAEGRRSQHASANALDIAGFRLKDGQRIELQKDWNGEGPKAQFLRQVHAGACESFNTVLGPDYNAAHHNHFHLDMGGWQICR |
1 | 1lbuA2 | 0.14 | 0.10 | 0.70 | 1.07 | DisCoVER | | -P--VN--FTYELNCNSDW---SGGKV-SAATAR----------ANALVTMWKLQ-A---MRHAM-------GDKPITVNGGFRSVCNSNVGGASNSRHMYGHAADLGAGSQ------GFC--------------ALAQAARHGFTEILGPGY-PGHNDHTHVAGGDGRFW- |
2 | 2ibgE | 0.12 | 0.09 | 0.78 | 1.05 | CEthreader | | QTIPNLSEYTNSASGPLEGVIRRDSPKFKDLVPNYNRDILFRDRLMSKRCKEKLNVLAYSVMNEWPG-------IRLLVTESWDEDYH----HGQESLHYEGRAVTIATS-----------------DRDQSKYGMLARLAVEAFDWVSYVSRR-----HIYCSVKSD---- |
3 | 1lbuA2 | 0.21 | 0.15 | 0.70 | 1.66 | HHsearch | | ---------------PVNFTAELNRNSDWS-----GG---KVS-AA--TARANALVTMW-KLQAM-RHAMGKPI---TVNGGFRSVTCNSNGGASNSRHMYGHAADLGAG----SQ-----------GF-CA----LAQAARHGFTEILGPGY-PGHNDHTHVAGGDAPSCG |
4 | 1u10C | 0.07 | 0.05 | 0.80 | 1.00 | DEthreader | | --------------QPVPGQSIGNGCIVGADTLPQSEYQVRTRYFGHPDLV-FIQRLSSQV-SNL-G-----GT-VLIGD-GGGRF----------ASHQTGLDVDIFLQLPKTRWPQALDLVHVVSTLWKPEIFSLIKLAAQDVTRIFVNPPWFQHRAH-HVRLRDQPLPP |
5 | 1u10C | 0.07 | 0.06 | 0.80 | 1.00 | DEthreader | | --------------QPVPGQSIGNGCIVGADTLPQSEYQVRTRYFGHPDLV-FIQRLSSQ-VSNL-G-----GT-VLIG-DGGGRF---H------ASHQTGLDVDIFLQLPKTRWPQALDLVHVVSTLWKPEIFSLIKLAAQDDVTRIFVNPWFQHRAH-HVRLRCQLPDG |
6 | 2ibgE | 0.12 | 0.09 | 0.71 | 0.27 | HHpred | | -------------QTIPNLSENSASGPKDLVPNYNRDILFRD-RLMSKRCKEKLNVLAYSV-----MNEWP-G-IRLLVTESWDEDYH----HGQESLHYEGRAVTIATS---DR-----------DQSKYGMLARL--AVEAGFDWVSYV-----SRRHIYCSVKSD---- |
7 | 1lbuA2 | 0.16 | 0.09 | 0.56 | 0.60 | MRFsearch | | ------------------------------------------------AATARANALVTMWKLQAMRHAMG--DKPITVNGGFRSVTCNSNVGASNSRHMYGHAADLGAG----------------SQGFCALAQAARNHG---FTEILGPGY-PGHNDHTHVAGGD----- |
8 | 1lbuA2 | 0.20 | 0.15 | 0.72 | 0.81 | SPARKS-K | | -------------------------PVNFTYAELNRCNSDWSGGKVSAATARANALVTMWKLQAMRHAMGDKPIT---VNGGFRSVTCNSNVGGANSRHMYGHAADLG----------------AGSQGFCALAQAARNH---GFTEILGPGY-PGHNDHTHVAGGDGRFWS |
9 | 2wfrA | 0.15 | 0.12 | 0.76 | 0.87 | MAPalign | | -PGVPERTLGASGPA------EGRVRFRDLVPNY-NPDIIFKDRLMTERCKERVNALAIA-VMNMW-----PGV-RLRVTEGW-DEDG---HHAQDSLHYEGRALDIT-TSD------RDR----------NKYGLLARLAVEAFDWVYYE-----SRNHVHVSVKADNSLA |
10 | 1lbuA2 | 0.10 | 0.07 | 0.72 | 0.87 | CEthreader | | -----------------PVNFTYAELNRCNSDWSGGKVSAATARANALVTMWKLQAMRHAM-----------GDKPITVNGGFRSVTCNSNGGASNSRHMYGHAADLGAGSQG--------------------FCALAQAARNHGFTEILGPGYPGHNDHTHVAGGDGRFWS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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