Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | IVVVFDFDKTIVDVDSDNWVIDELGFTDLFNQLLPTMPWNSLMDRMMMELHSHGKTIEEIEEVLCRIPLHSRVIPAIKAAHALGCDLRIVSDANMFFIETILKHLGIREYFSEINTNPGYVNEEGRLRILPYHDFNKVSHGCSLCPPNMCKGSIIDRIQDSISQDDKKRFIYLGDGSGDYCPSLRLKEKDFMMPRKNFPVWDLICKDPLLVKAEIHGWSDGEELEQILLHLI |
1 | 3p96A3 | 0.14 | 0.12 | 0.87 | 1.33 | DEthreader | | RLIVFDVDSTLVQGEVIEMLAAKAGAEGQVAAITDAALFAQSLQQRVATLA--GLPATVIDEVAGQLELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAE--EL-M-LDYVAANELEIVDGTLTRVVGPII------------DRAGKATALREFAQRAG-VPMAQTVAVGDGANDIDMLA-A-AGLGIAFN--AK--PALRE----V-ADASLSHYLDTVLFLLGVT- |
2 | 1rkvA | 0.16 | 0.14 | 0.85 | 2.33 | HHpred | | EIACLDLEGVLVP-EIWIAFAEKTGIDALKATTRDIPDYDVLMKQRLRILDEHGLKLGDIQEVIATLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFP----TLLCHKLEIDDSDRVV--GYQL---------RQK--DPKRQSVIAFKSL-----YYRVIAAGDSYNDT-TMLSEAHAGILFH-A---PENVIREFPQ---FPAV--HTYEDLKREFLKAS |
3 | 1l7nB | 0.16 | 0.14 | 0.85 | 0.61 | DisCoVER | | KLILFDFDSTLVNNETIDEIAREAGVEEEVKKITEAEGFEQSLRKRVSLLK-D-LPIEKVEKAIKRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEK--L--GLDYAFANRLIVKGKLTGDVEGEV-----------LKE-NAKGEILEKIAKIEGI-NLEDTVAVGDGANDI-SF-KK-AGLKIAFCAKPIL---KE-----KADICIEKRDLREILKY----- |
4 | 1qh9A | 0.14 | 0.12 | 0.84 | 0.33 | MRFsearch | | -GIAFDLYGTLFDVHSVVGRCDEAEYTWLRSLMNRYVNFQQATEDALRFTCRHARTRSTLCDAYLRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQ-------------------------VYKPDNRVYELAEQALG-LDRSAILFVSSNAWDATGARYFGFPTCWINRT-GNVFEEMGQT------PDWEVTSLRAVVELF---- |
5 | 1rkvA | 0.14 | 0.12 | 0.85 | 1.37 | SPARKS-K | | EIACLDLEGVLVP-EIWIAFAEKTGIDALKATTRDIPDYDVLMKQRLRILDEHGLKLGDIQEVIATLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPT----LLCHKLEIDDSDRVVGYQLR-------------QKDPKRQSVIAFKSL-----YYRVIAAGDSYNDTTMLSEAH-AGILFHAP-----ENVIREFP----QFPAVHTYEDLKREFLKAS |
6 | 4ezeA | 0.15 | 0.13 | 0.87 | 0.61 | MAPalign | | GIIAFDMDSTFIAEEGVDEIARELGMSTQITAITGKLDFNASFTRRIGMLK--GTPKAVLNAVCDRMTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKAR--Y--QLDYAFSNTVEIR-DNVLTDNIT----------LPIMNAANKKQTLVDLAARLNI-ATENIIACGDGANDLPMLE-H-AGTGIAWK----AKPVVRE-------KIHQINGFELLLFLIEDEL |
7 | 4ex6A | 0.14 | 0.12 | 0.86 | 0.48 | CEthreader | | RGVILDLDGTLADTTITAEVLAAMGTARGAILSTVGRPLPASLAGLLGVPVEDPRVAEATEEYGRRFLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDD-------------------------SVERGKPHPDMALHVARGLGI-PPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRA------GADTVVDSFPAAVTAVLDG- |
8 | 1rkvA | 0.15 | 0.13 | 0.85 | 1.11 | MUSTER | | EIACLDLEGVLVP-EIWIAFAEKTGIDALKATTRDIPDYDVLMKQRLRILDEHGLKLGDIQEVIATLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPT----LLCHKLEIDDSDRVVGYQL-------------RQKDPKRQSVIAFKSL------YRVIAAGDSYNDTTMLSEAH-AGILFHAP----ENVIREFPQ-----FPAVHTYEDLKREFLKAS |
9 | 4ex6A | 0.13 | 0.11 | 0.85 | 0.98 | HHsearch | | RGVILDLDGTLADTPAAAEVLAAMGTAVSRGAITVGRPLPASLAGLLGVVE--DPRVAEATERFGPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDS----VERGK----------PHP-----------DMALHVARGLGI-PPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDE-LMR-----AGADTVVDSFPAAVTAVLDG- |
10 | 2feaA | 0.17 | 0.15 | 0.88 | 1.54 | FFAS-3D | | -FIICDFDGTITNDNIINIKTFAPPEWALKDGVLSKTL--SIKEGVGRFGLLPSSLKEEITSVLEDAKIREGFREFVAFINEHEIPFYVISGGDFFVYPLLEGIVEKDR----IYCNHASFDNDYIHIDWPHSCKGTCSNQC-----GCCKPSVIHEL------SEPNQYIIIGDSVTDVEAA---KLSDLCFARDY--LLNECREQNLN----HLPYQDFYEIRKEIENVK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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