Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | LMISLTVIEIIKKLLTTVSREALQDDYNISELREGMIPAYNLYEKYDKVYTDDKSFLSKFKEAMKTGDVTGLTAPKGKLLISTMAAGLTDKDVELLEDLLNKGKINDSFRV |
1 | 2fiyA | 0.08 | 0.06 | 0.76 | 0.83 | DEthreader | | MGDYLRLVAGLCRLQQALLDNPPALPLLVREGA-LPWLDLL---------GY---P--AP--AN----A--AVG---AALEQL-REAEEGQRKAWAIALLSGQVGLQVAWH |
2 | 3iz5s | 0.13 | 0.13 | 0.96 | 0.72 | CEthreader | | LLVGNVGLIFTKGDLKEVREEVAKYKVGAP-ARVGLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKLG---IRPFSYGL |
3 | 1lajC | 0.04 | 0.04 | 0.93 | 0.58 | EigenThreader | | TQQVNRLANIASSSCRAGYTYTSLDVRPTLIIPPKKKVSCVQVRLSTIWVSLLLTSENVFKLFTDGLAHVPTGIQPNNKIDMSNVGAEIGDMGK--------YDDDEMVIH |
4 | 2ycbA3 | 0.24 | 0.11 | 0.45 | 0.25 | HHpred | | ---------------------------------------------------AEKELVKTIYSTLRR---------GGKILIPVFAVGRAQELMIVLEEYIRTGIIDE-VPV |
5 | 1in0A | 0.14 | 0.11 | 0.79 | 0.53 | MRFsearch | | ---------QLEQLIEILIGSCIKRGIEHSSLDIESEHHGKLYSKEIKLKQGETEMAKKITKLVKDSKIKVQTQIEQVRVTGK-----SRDDLQAVIQLVKS--------- |
6 | 3lmmD3 | 0.13 | 0.12 | 0.93 | 0.47 | FFAS-3D | | ---IAIVLYLLFQTIDVVARGLQSGKEALEAARQTTVAGAPLIIAHDGVWLLGNACREILRKVEPSPFSPVRYLSVGDLATSDLACGVSRGTAACVDGLVDEERVV----- |
7 | 1kafA | 0.05 | 0.05 | 0.85 | 0.67 | SPARKS-K | | ----MEITSDMEEDKDLMLKLLDKNGFVLKKLENG--IRNFEINNNGNMRIFGYKMMEHHIQKFTDIGMSCKIAKNGNVYLDIKR---SAENIEAVITVASEL-------- |
8 | 2pefA | 0.17 | 0.14 | 0.85 | 0.51 | CNFpred | | AMLALAMTANADNETLAQMEKALGKDISIEDLN-KLTIANSIWFKENDFMP-SKDFLQIIADYYK------------ADIFKAA---FDSSTVSDINNWVKSGMIDKILNK |
9 | 5ez3A | 0.04 | 0.04 | 0.83 | 0.83 | DEthreader | | MDMVTLTRLDCAVASAGLMRSGLAAVSVEQLMQRVLDMAVAG----------ATALSMRLARAFMDAWISQAARQGDADAFI-RRTYGMLD-ARHNA--M----RIIDLY- |
10 | 2kpoA | 0.14 | 0.13 | 0.91 | 0.65 | MUSTER | | MLLYVLIISNDKKLIEEARKMAEKANLELRTVKTEDELKKYLFRKESLILVSNDEELDKAKELAQKMEIDV------RTRKVTSP----DEAKRWIKEFSEEGGSLEHHHH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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