Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | RDNIQINQRQCILLLDIFYSAYKSIADEMKDNLKFEERNLKWKVLEMPLRELHRIFKEGEAYIKESLESKDWWVKAITLYQNTDCVELHISNLLSCIPVVIEAIESAAQLSGWEQDEMQKKKRVYSNKYHKEWIDPELFQWKFAKQYLVTQDFCNRIDNVWKEDRWILKNKIQEKENSRFRKQERKLADLLLRNLDSSKSLKDKLLPSSILLG |
1 | 6ka4A | 0.57 | 0.56 | 1.00 | 10.95 | HHpred | | KDSIQINQRQCSLLLDLFTAAYESISVSMRSNLRFKEKNTKWKILEQPLRELLWVVREGEAYVRMSLEPKGFWAKAIVLHSNRDCTELHIHNLLSCLPIIVEAIETASEVSGWDEEEMSKKRLVHSNKYMKQWNDSQMFTWKFGREYLVTEDFCNRFESAWTEDRWILIKELQEKKQSGSSKHERKMADFLLKHLGDGN-ESPKLFPSSLLDN |
2 | 6ka4A1 | 0.56 | 0.53 | 0.95 | 1.50 | MRFsearch | | -DSIQINQRQCSLLLDLFTAAYESISVSMRSNLRFKEKNTKWKILEQPLRELLWVVREGEAYVRMSLEPLGFWAKAIVLHSNRDCTELHIHNLLSCLPIIVEAIETASEVSGWDEEEMSKKRLVHSNKYMKQWNDSQMFTWKFGREYLVTEDFCNRFESAWTEDRWILIKELQEKKQSGSSKHERKMADFLLKHLGDGNESPK---------- |
3 | 6ka4A1 | 0.57 | 0.54 | 0.94 | 3.28 | FFAS-3D | | KDSIQINQRQCSLLLDLFTAAYESISVSMRSNLRFKEKNTKWKILEQPLRELLWVVREGEAYVRMSLEPKGFWAKAIVLHSNRDCTELHIHNLLSCLPIIVEAIETASEVSGWDEEEMSKKRLVHSNKYMKQWNDSQMFTWKFGREYLVTEDFCNRFESAWTEDRWILIKELQEKKQSGSSKHERKMADFLLKHLGDGNES------------ |
4 | 6ka4A1 | 0.56 | 0.54 | 0.95 | 10.19 | HHpred | | KDSIQINQRQCSLLLDLFTAAYESISVSMRSNLRFKEKNTKWKILEQPLRELLWVVREGEAYVRMSLEPKGFWAKAIVLHSNRDCTELHIHNLLSCLPIIVEAIETASEVSGWDEEEMSKKRLVHSNKYMKQWNDSQMFTWKFGREYLVTEDFCNRFESAWTEDRWILIKELQEKKQSGSSKHERKMADFLLKHLGDGNESPK---------- |
5 | 6ka4A | 0.57 | 0.56 | 0.99 | 1.45 | MRFsearch | | -DSIQINQRQCSLLLDLFTAAYESISVSMRSNLRFKEKNTKWKILEQPLRELLWVVREGEAYVRMSLEPLGFWAKAIVLHSNRDCTELHIHNLLSCLPIIVEAIETASEVSGWDEEEMSKKRLVHSNKYMKQWNDSQMFTWKFGREYLVTEDFCNRFESAWTEDRWILIKELQEKKQSGSSKHERKMADFLLKHLGD-GNESPKLFPSSLLD- |
6 | 6lbaA | 0.47 | 0.44 | 0.94 | 2.33 | FFAS-3D | | QDDILINQRQCCLLLELFSLAFNTVAEEIRQNLKLEEKHTKWRALEQPLRELTRVFKEGELYVKHCMDNSDWWGKVINLHQNKDCVEFHIHNLFCYFSAVVEAIE----AAGLDPSEMERRRVVFSRKYDREWNDPKMFQWRFGKQYLLSR-ICSRFEHSWREDRWNLVEALQEKRKSDSKTEKRLADLLLKKLTFNGKLFPSSIL------- |
7 | 6ka4A | 0.57 | 0.56 | 0.99 | 2.28 | FFAS-3D | | KDSIQINQRQCSLLLDLFTAAYESISVSMRSNLRFKEKNTKWKILEQPLRELLWVVREGEAYVRMSLEPKGFWAKAIVLHSNRDCTELHIHNLLSCLPIIVEAIETASEVSGWDEEEMSKKRLVHSNKYMKQWNDSQMFTWKFGREYLVTEDFCNRFESAWTEDRWILIKELQEKKQSGSSKHERKMADFLLKHL-GDGNESPKLFPSSLLD- |
8 | 6ka4A | 0.43 | 0.38 | 0.88 | 1.00 | DEthreader | | ----QINQRQCSLLLDLFTAAYESISVSMRSNL-RFKEKTKWKILEQPLRELLWVVREGEAYVRMSLEKLGFWAKAIVLHSNRDCTELHIHNLLSCLPIIVEAIETASEVSEEMSKKRLVHSNKYMKQWND--SQ-FTW-FG--REYLVTEDFCNRFESAWTEDRWILGDGNESPKLFPIDALLPQITPLLS--------------EYLKKIG |
9 | 3cf4A | 0.06 | 0.05 | 0.84 | 1.00 | DEthreader | | DMKGHNGREFFLRVITGTACHAAHGRHLLDHLIEKYG--EDL-TLGEVK-PAMEYVEEQLTQLLATVHAGQESA-EIDYD---SKALFSGSLDHVGMEISDI-VQ-AA---------Y--DF-PKAD--PEAPLVEIGCAIDLTRY-DEQCVGCFSKASSGSSYRRALI--A--KTYEEDKWKPIPPA-PEF-LTAEAI-M-MA-ACI-RPSP |
10 | 2msvA | 0.08 | 0.05 | 0.60 | 0.83 | DisCoVER | | ---MKYCKKQCRRLGHRVLGLIKPLEML----QDQGKRSVPSEKLTTAMNRFKAALEEANGEIEKFSNRSNICRFLTAQDKI--LFKDVNRKLSDVWKELSLLLQVE---Q-----------------------------RMPVSPIQG---A-SWAQED----------------------------------------QQDADDRRAFQM- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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