Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | RKRSITNYSPTTGTCRMSPFASPTSSKVQEYKNGPSNGKRKKLNHLSLTKRKESTTKDDEFMVLLSKVEKSSEEIMEIMQSLSIIQALEGSRELENLIGISCTSRFLKREMQKTKELMTKVMKQKLFEKKSSGLPNKD |
1 | 6tpiA | 0.07 | 0.04 | 0.67 | 0.71 | DisCoVER | | RGQAFWPVRYKGMVIGASEGTEVKAGRVILADGLVVVVLYGYNQSALVSVGSQVRAG-QP-IAL--V---G--SS-----------GGQGRPS--LYFEIRRQGQAV--N--PQ--P--WL--G-------------- |
2 | 4o5jA | 0.04 | 0.04 | 0.88 | 0.83 | DEthreader | | -NTQSPFNAAVITS-QTNTKGNN-LCCSTVSNALMIPILQQVTLSQNHLTFQNKQ-IS-YAQDIFNLFNSIPAQYKYLEKAYLIPSTPTN---PY--R-QVV---NLNQEVQTIKNNVSYYGNRVDAALSVAVYNL-- |
3 | 1jb0A1 | 0.05 | 0.05 | 1.00 | 0.54 | CEthreader | | SFEKWAKPGHFDRTLARGPQTTTWIWNLHALAHDFDTHTSDLEDISRKIFSAHFGHLAVVFIWLSGMYFHGAKFYEAWLADPTGIKPSAQNGDVGGGFHGIQIEFQLYCTAIGGLVMAGLMLFAGWFHYHKRAPKLEW |
4 | 5vmsA | 0.04 | 0.04 | 1.00 | 0.57 | EigenThreader | | NIQGRVYNFLERPTGQYNNLATETLFWMEIVLVVFFGAEYVVRLWSAGCRSKYVGRLRFARKQELITTLYIGFLGLIFSSYFVYLAEKPQTWIGKTIASCFSVFAISFFALPAGILGSGFAAASLIQTAWRCYAAENP |
5 | 4y66D | 0.16 | 0.12 | 0.70 | 0.25 | HHpred | | --------------TSNKPQNVQT-----AINNTGS-KYGKTTNQNLLEVDAQLMEVNAQINDLKAQVEKLTQQGETLRITQRNLEAAPITEVLKQEV------DELRQQVSANDEKLRLVRE--------------- |
6 | 6xm1B | 0.18 | 0.09 | 0.54 | 0.37 | MRFsearch | | ----------------------------------------------------------PRWVDISDEVTEKLAEIATKSQKLDRLHKKAEEAEIERLT------QEITRGFHDCRGCILRIEQMVREAKASGQLTRAD |
7 | 5mqfH | 0.15 | 0.12 | 0.84 | 0.59 | FFAS-3D | | -------ICSISNEVPEHPCVSPVSNHVAENGTDPINNQPLSEEQLIRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTR-----QELSHALYQHDAACRVIARLTKEVT--AAREALATLKPQ-------- |
8 | 5yfpH1 | 0.08 | 0.07 | 0.79 | 0.72 | SPARKS-K | | --------------------------NSTSLRKML---ANPHFNAKDFVHDKLGNASAITIDKFTSNLTDLSIQVQEEVKLNINKSYNEIMTVNNDLNVAMLELKRVRANINDLNEVLDQCTKIAEKRLQLQDQIDQE |
9 | 7jh6A | 0.18 | 0.09 | 0.52 | 0.47 | CNFpred | | ------------------------------------------------------------AIKQYEKLRQTGDELVQAFQRLREIFDKGDDDSLEQVLE------EIEELIQKHRQLASELPKLELQAIKQYREALEY |
10 | 6hydA | 0.09 | 0.07 | 0.85 | 1.00 | DEthreader | | ---DMEDTSIEKVLMYFTLKFHKDKD------GNNELNSSDAFFFKILLLMLASMFSLITVRHPLSEFTNDYCKINGMMLDLEHFTCLIVKSVISFTLPVITRYNAMTVVLERSRIYYTNTSRGM--L---------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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