>PF06707 (208 residues) AVDVELVLAVDVSLSMSPGELEIQRHGYAAALTHQSVIDAISDGLHGRIAVTFFEWAGDF SQRVLVPWTVIASAEDAEKIAQMLTASPSQSARRTSISGAINFASDLFAESPYKGVRRVL DVSGDGPNNQGPSVTEARDALVAEGITINGLPLMTNEGYASSFDTSDLDNYYTNCVIGGP GAFMIPVNEWSQFPEAIRRKLVIELAGA |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
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Seq | AVDVELVLAVDVSLSMSPGELEIQRHGYAAALTHQSVIDAISDGLHGRIAVTFFEWAGDFSQRVLVPWTVIASAEDAEKIAQMLTASPSQSARRTSISGAINFASDLFAESPYKGVRRVLDVSGDGPNNQGPSVTEARDALVAEGITINGLPLMTNEGYASSFDTSDLDNYYTNCVIGGPGAFMIPVNEWSQFPEAIRRKLVIELAGA | |||||||||||||||||||
1 | 4cn8A | 0.14 | 0.12 | 0.89 | 1.33 | DEthreader | DVQADIIVLFDDSSSIQYDN-KEN-YQMMKDFVKE-LVDSFT-TVVGSQFGV-VQFSQ-G-VKTAFPLNKFKTKEDIKKGIQDM--VPR-NGGQTEIGTGLKHVRESFSGGGNPDKQKIVILMTDGKSNAGAPPQHEAHKLKAEGVTVIAIGIG------Q-G---FVKTELE-QIA-TMKNYVLTTNSFSELSTLLKLVIDLACEPR | |||||||||||||
2 | 4wfqA | 0.16 | 0.14 | 0.89 | 1.53 | HHpred | -IIRSLILTLDCSEAMLEKDLRPNRHAMIIQYAIDFVHEFFDQNPISQMGIIIM---RNGLAQLVSQVS--GNPQDHIDALKSIR--KQEPKGNPSLQNALEMARGLLLPVPAHCTREVLIVFGSLSTTDPGDIHQTIDSLVSEKIRVKVLGLSAQV---------AICKELCKATNYGDESFYKILLDETHLKELFNEAVT------ | |||||||||||||
3 | 1v7pC | 0.16 | 0.14 | 0.90 | 0.70 | DisCoVER | --LIDVVVVCDESNSI----Y--PWDAVKNFLEK-FVQ-GL-DIGPTKTQVGLIQYAN-N-PRVVFNLNTYK-T--KEEMIVATSQTSQYGGDLTNTFGAIQYARYAYSSGGRRSATKVMVVVTDGESHDGSMLKAVIDQCNHDNILRFGIAVLGYLNRNALD-TKNLIKEIKAIASIPTERYFFNVSDEAALLEKAGTLGE-QF--- | |||||||||||||
4 | 1v7pC | 0.16 | 0.15 | 0.91 | 0.35 | MRFsearch | ---IDVVVVCDESNSIYPW--------DAVKNFLEKFVQGLDIG-PTKTQVGLIQYAN--NPRVVFNLN---TYKTKEEMIVATSQTSQYGGDLTNTFGAIQYARKYAYSAARRSATKVMVVVTDGESHDGSMLKAVIDQCNHDNILRFGIAVLGYLNRNA-LDTKNLIKEIKAIASIPTERYFFNVSDEAALLEKA-GTLGEQIFSI | |||||||||||||
5 | 4wfqA | 0.15 | 0.13 | 0.91 | 1.28 | SPARKS-K | GIIRSLILTLDCSEAMLEKDLRPNRHAMIIQYAIDFVHEFFDQNPISQ--MGIIIMRNG---LAQLVSQVSGNPQDHIDALKSIRK--QEPKGNPSLQNALEMARGLLLPVP-AHCTREVLIVFGSLSTTDPDIHQTIDSLVSEKIRVKVLGLSA--------QVAICKELCKATN-YGDESFYKILLDETHLKELFNEAVTPLPV-- | |||||||||||||
6 | 6m3yA5 | 0.13 | 0.12 | 0.92 | 0.74 | MAPalign | VKPVDIVLVVDMSGSM------ENRAGAVRTGVK-NFLTSIQNALGNYVNVGLIGFSSKSGYIS-VKLGKAGNASQQQAINGALS---PRFQGGTYTQIGLRQGSAMLNADTS-GNKKMMILLTDGVPTFSNATLGEAKIAKDSGNEVHALGIQLA-DDDHYMTKEKIRQNMQLIT--NSPDLYEDADSADAVEAYLNNQAKDIIK-- | |||||||||||||
7 | 1auqA | 0.08 | 0.07 | 0.89 | 0.59 | CEthreader | SRLLDLVFLLDGSSRLS-----EAEFEVLKAFV-VDMMERLR-ISQKWVRVAVVEYH--DGSHAYIGLKDRKR---PSELRRIASQVKYAGSQVASTSEVLKYTLFIFSKIDRPEASRIALLLMASQEPMSRNFVRYVQGLKKKKVIVIPVGIGPH----------ANLKQIRLIEKQAPENKAFVLSSVDELEQQRDEIVSYLCDLA | |||||||||||||
8 | 1v7pC | 0.16 | 0.15 | 0.91 | 1.16 | MUSTER | --LIDVVVVCDESNSIYP-------WDAVKNFL-EKFVQGLDIGPTK-TQVGLIQYAN--NPRVVFNLNTYKT---KEEMIVATSQTSQYGGDLTNTFGAIQYARKYAAASGRRSATKVMVVVTDGESHDGSMLKAVIDQCNHDNILRFGIAVLG-YLNRNALDTKNLIKEIKAIASIPTERYFFNVSDEAALLEKAGTLGEQIFSI- | |||||||||||||
9 | 6fpyA | 0.11 | 0.10 | 0.88 | 1.42 | HHsearch | NMNKNVVFVIDISGSMRG-----QKVKQTKEALL-KILGDMQPG--DYFDL--VLFGTR--VQSWKGSLVQASEANLQAAQDFVRGF--SLDEATNLNGGLLRGIEILNQVQLSNHASILIMLTDGDPTEGVDRSQILKNAIRGRFPLYNLGFGHNV------D-----FNFLEVMSMENNGRAQRIYEDHDATQQLQGFYSQVAKPL | |||||||||||||
10 | 4wfqA | 0.16 | 0.14 | 0.89 | 1.62 | FFAS-3D | GIIRSLILTLDCSEAMLEKDLRPNRHAMIIQYAIDFVHEFFDQNPISQMGIIIMR---NGLAQLVSQVS--GNPQDHIDALKSIRKQE--PKGNPSLQNALEMARGLLLPVPAHCTREVLIVFGSLSTTDPGDIHQTIDSLVSEKIRVKVLGLSA--------QVAICKELCKATNYGDESFY-KILLDETHLKELFNEAV------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |