Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | ELRGGLIAASILKLDPWQSYIISIIGNILPIPFILWFIKKIINWMRTKKCFAKLTNWLDKKVEKNKTSIEKYGFWGLVLFVGIPLPGTGAWTGSLIASLLDMDKKKSFPAILLGVFMASII |
1 | 5wddA | 0.03 | 0.02 | 0.83 | 1.00 | DEthreader | | --------S----P---T-DKELVSQAKALCRDYINSRLIRAGV----DELEYIRPVYRNIARQLNISLHSVVTDAFLAVAAIFGKVVSLYAVAAGLAVDCQAVHTIVDCLGEFVRKTLVT |
2 | 1jb0B | 0.03 | 0.02 | 0.93 | 1.00 | DEthreader | | LAQHMYSLPPYAFIDHTTMAALYTHHQYIAGFLMVGAFAHGAIFLVYDPNLDRVLQHKEAIISHLSWVSLFGF-L-VHHAIA-------GLHTTTLILVKALAMFWMLNTIGWVTFYWHKH |
3 | 6h1nA | 0.08 | 0.07 | 0.79 | 1.00 | DEthreader | | --------------G-LSMSCWLREQTLLLAEDYISFCSGI---------KEMEQQHRTKFRSLSQEFLDTCGPKCLQSVMREVGRVVSIFTFTGVLASELLEE-GSRRLAETIADYLGGK |
4 | 1jb0A2 | 0.05 | 0.05 | 0.95 | 1.00 | DEthreader | | IAQHMYAMPPYPYLDYPTQLSLFTHHMWIGGFLVVGGAAHGAIFMVYDNNLDRVLRHRDAIISHLNWVC-IFL-GF-SF--VHHIH-AFTIHVTVLILLKHFLGLFWMYNCISVVIFHFWK |
5 | 5d0yA | 0.09 | 0.06 | 0.65 | 0.70 | DisCoVER | | IKVVLGQFKVGDATLQV-GL--GFIGSV-ML--GYLFG---------------PW-WG--FA-----------------GGALSDSAALESMIYGFFLYKKPIQIWRVIASVICVHMVVV- |
6 | 6v4mA | 0.04 | 0.03 | 0.82 | 1.00 | DEthreader | | ----------------DNELSGIQNTSVSLAADYVYMRLATEG-----DLERKF-HDYIAPLKNCLGISADMDMRMFFSALDFISRIVAMYAFAGSVALACRTVIAIPEWIMLYMRRIAPW |
7 | 4he8M2 | 0.09 | 0.09 | 1.00 | 0.46 | CEthreader | | SALYGAWVAFAAKKTLLAYAGLSHMGVAALGVFSGTPEGAMGGLYLLAASGVYTGGLFLLAGRLYERTLAALALILFLAMVGLPGLSGFPGEFLTLLGAYKASPWLAALAFSVIASAAYAL |
8 | 5wddA | 0.03 | 0.02 | 0.83 | 0.72 | EigenThreader | | SPT----------------DKELVSQAKALCRDYINSRLIRAGLRLGDELEYIRPNVYRN----IARQLETVVTDAFLAVAITWGKVVSLYAVAAGLAVDCVMVHTIVDCLGEFVTWLKRR |
9 | 1l7vA2 | 0.14 | 0.13 | 0.93 | 0.21 | HHpred | | -AGVGLIAAVLLGQGNWALGLCAIAGALIITLILLRFARRH-LSTSRLLLAGIICIYSTVDLRQL-YWWRQSLALIPVLICCQRPNLLGE----ISARQLGLPLWFWRNVLVAATGW-VG- |
10 | 2jlnA | 0.06 | 0.06 | 0.93 | 0.23 | MRFsearch | | --IFIAAGQMTSSFQVWQVIVAIAAGCTIAVILLFFTQSAAIRWGNFTVAARMPFGIRGSLIPITLKALLSLFWFGFQT------WLGALALDEITRLLTGTNLPLWIVIFGAIQVVTTFY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|