>PF06694 (319 residues) MEEIQKKLATLNYPRANAPAQSLLFAGMERYALLEWLFFKLLGDKSPFSQQNLQGDAVDR DEETSRIQYLAEIAKFLGITTTVDPEAIQGRGSYEDRMEMLRLIVDLVEASMYADNPEWS VDEQVAKDIQLIDAIAEKQSQIFSEECKLFPADVQIQSIYPLPDISDLEKQLSDQSNRLL SLQEMVDDLASKHPYNPDEEYVDVEAKLRGHLESFLDTARTFNTIYTKEIRPWTHMMEVP QLHGFGPAANRLLEAYKMLWKFLGNLKNLRDSHAAVAAGSSETVAGEPSSVTRIISECET ALTLLNRDLAILSASIARE |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | MEEIQKKLATLNYPRANAPAQSLLFAGMERYALLEWLFFKLLGDKSPFSQQNLQGDAVDRDEETSRIQYLAEIAKFLGITTTVDPEAIQGRGSYEDRMEMLRLIVDLVEASMYADNPEWSVDEQVAKDIQLIDAIAEKQSQIFSEECKLFPADVQIQSIYPLPDISDLEKQLSDQSNRLLSLQEMVDDLASKHPYNPDEEYVDVEAKLRGHLESFLDTARTFNTIYTKEIRPWTHMMEVPQLHGFGPAANRLLEAYKMLWKFLGNLKNLRDSHAAVAAGSSETVAGEPSSVTRIISECETALTLLNRDLAILSASIARE | |||||||||||||||||||
1 | 1eq1A | 0.09 | 0.05 | 0.50 | 0.67 | DisCoVER | ----------------------------------------------------------------------------------------PAGGNAF--EE-MEKHAKEFQKTF--------SE--QFNSLV-NS--K---------------NTQ--DFNKALKDG--SD-SVLQQL--SA-FSSSLQ-GA--ISDA---NG-KAKEALEQARQNVEKTA---E-ELRKAHPDVEKEANAF-KDKLQAAVQTTVQESQKLAKEVA-----SNME------------ETNKKLAPKIKQAYDDFVKHA-EE-VQKKLHAA- | |||||||||||||
2 | 1f31A | 0.08 | 0.06 | 0.72 | 0.83 | DEthreader | LELIHVLHGGKVDDPVPEQSTDAIQ----------QDPSIIT-PSTDKSIYDKQNFRVEFDKLYKSL-MF----------------------------------GF-TET-NIAENYK--------KT-RAS-YFSDSLYKDNEDLFFIADKNSFSDL---------------------SFFSMDYIKTANKVVEAFGWVI---F--E--YIGLALNVGTAFFAGASILLFIPELLI----QWLSTVNTQFYTIKEGMYKALNYQAQALEEIIKYRYNIYSEEKNINIDFNDINSKLNEGINQAIDNINNFNIEMFNYN | |||||||||||||
3 | 4iggA | 0.10 | 0.09 | 0.93 | 0.57 | CEthreader | MAAARGILQKNVPILYTASQACLQHPVAAYKANRDLIYKQLQQAVTGISNAQATASDDASQHQGGGGGELAYALNNFDKQIIVDPLSFSEERFRPSLEERLESIISGAALMADSSCTRDDRRERIVAECNAVRQALQDLLSEYMGNAGRKERSDALNSAIDKMRRQLRKAVMDHVSDSFLETNVPLLVLIEAAKNGNEKEVKEYAQVFREHANKLIEVANLACSISNN--------------------EEGVKLVRMSASQLEALCPQVINAALALAAKPQSKL--AQENMDLFKEQWEKQVRVLTDAVDDITSIDDFL | |||||||||||||
4 | 5j1iA | 0.07 | 0.06 | 0.95 | 0.73 | EigenThreader | EACETRTVHRLRLPLDKEPARECAQRIAEQQKAQAEVEGLGKGVARLSAEAEKVLALSPAAPTLRSELELTLGKLEQVRSL--SAIYLEKLKTISLVIRGTQGAEEVLRAHEEQLKEAQALKKLRAQAEAQTFDALRDELRGAQEVGERLQQRHGE--RDVEVERWRERVAQLLERW-------QAVLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQIQAMQAVREQLRQEQALLEEIERHGEKVEECQRFAKQYINAIKDYELQLVTYKAQLEKVQS----GSESVIQEYVDLRTHYSELTTLTSQY | |||||||||||||
5 | 3edvA | 0.12 | 0.10 | 0.83 | 0.36 | HHpred | ---------------------------REVDDLEQWIAERE-VVAGRFREFA------RDTNGQERVDTVNHLADELINSGHSDAATIAEWKDGLN--EAWADLLELIDTRTQILAASYEL-HKFYHDAKEIFGRIQDKHKKLP---EELGRDQNT--------VETLQRMHTTFEHDIQALGTQVRQLQEDAAYAGDEAWKSLCESRRVRLVDTGDKF-RFFSMVR-DLMLWMED-VIRQAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYA----SEEIKEKLLQLTEKRKEMIDKWEDR | |||||||||||||
6 | 1sjjA | 0.16 | 0.15 | 0.92 | 0.38 | MRFsearch | --TLQTKLRLSNRPAAEKGYEEWLLNEIRRLERLDHLAEKFRQKEAMLQQKDYETATLSEIKHQDRVEQIAAIAQELNELDYYDSPSVNARCQTQKRREALERTEKLLETID-------QLYLEYAKRAAPFNNWMEGAMEDLQ----------------TIEEIQGLTTAHEQFKATLPDADKERQAILGIHNEYTTITPQEINGKWEHVQQQNERLRKQFGAQA-NVIGPWIQTKSIEMHGTLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQQIQEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTR | |||||||||||||
7 | 1cunA | 0.06 | 0.04 | 0.66 | 1.05 | FFAS-3D | VHQFFRDMD----------------------DEESWI--------------------------KEKKLLV-------------------SSEDYGRDLTGVQNLRKKHKR----------LEAELAAHEPAIQSVLDTGKKLSDDN---------------TIGKEEIQQRLAQFVDHWKELKQLAAARGQR-------------LEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMKGLKGKVSDLEKAAAQRKAKLDENSA-- | |||||||||||||
8 | 3ay5A | 0.10 | 0.08 | 0.86 | 0.74 | SPARKS-K | --------------------------LASPLEQLRHLAEELRL---LLPRVRVGEAT-EEFNREMFWRRLNEAAVTVSREATTLTIVFSQLPSPQETQKFCEQVHAAIKAFIAYLLPKDQRKLVRGATLDIVDGMAQLMEVLSVQQMPQIPRDN----------KAAALLMLTKNVDFVKDAHEEMEQAVEESD-PQDLYWSEDDQELIIPCLALVRASKACLKKIRMLVAENGKKDQVAQLDDIVDISDEISPSVDDLALSIINSAKLVSVLKKALEITKASH-VTPSWIPLLINAIDHCMNRIKELTQSELEL---- | |||||||||||||
9 | 4iggA | 0.12 | 0.10 | 0.82 | 0.88 | CNFpred | IDKMTKKTRDLRRQLRKAVMDHVSDSFLETNVPLLVLIEAAKNGNEKEVKEYAQVF-------REHANKLIEVANLACSIS-NNEEGVKLVRMSASQLEALCQVINAALALAAK--QSKLAQENMDLFKEQWEKQVRVLTDAVDDIT-------------------SIDDFLAVSENHILEDVNKCVIALQE----------KDVDGLDRTAGAIRGRAARVIHVVTSEMDNYE----------PGVYTEKVLEATKLLSTVMPRFTEQVEAAVEALSSDPAQPMD--------ENEFIDASRLVYDGIRDIRKAVLMI | |||||||||||||
10 | 6l7eA | 0.10 | 0.07 | 0.71 | 0.83 | DEthreader | ------------DLLH------ALSSE-NVAHSVLLWADKLQPAMTAFWDWLNTYTPGS--QIVQYCQALAQLEM-V-YHST-------------G-INENAFRLFVTKPEMGAATG------AA-AHDALSLIMLTRFADW------------------LLSAAV--A-T-SQ--G--GG--KL--PE-SFMSLWRFPHMLENARGMVSQLTQFGSTLQNIIERQDAEALNALLQNQNQANWLRGRLAAIYFQFYDLAVARCLMAEQAWKGLANGCEAL--AV--SHGMNDSG-QFQLDFNDGKF------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |