Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | DETVSLYQNADDCSRANPSMSEQCTTAYNNALKEAEKTAPKYANREDCVAEFGESQCTQAPAQAGMAAQSQQSGGSFWMPLMAGYMMGRMMGGGYAQQPLFTSKNAASPANGKFVDASGKNYGPATAGGRTMTVPKTAMAPKPAVTNTITRGGFGETVAKQTSMQ |
1 | 1xfuA4 | 0.06 | 0.04 | 0.72 | 0.81 | DisCoVER | | LKGLFKKIA--RE-------------LN--TY--I---LFRPV--------------NKLATNLIKSGVATKGTADYDLFALAPSLEIGIERTLSNWQLTE-QDN--------EEFPEKDNEIFIINPEGEFILTK-NWMTGRFIEKNITKDYLYYFNRSAYIE- |
2 | 5jxfA | 0.04 | 0.04 | 0.85 | 0.67 | DEthreader | | ----GGMWIPLNETEMMKISADDIYSSLKDA--VPHFGTSVGLI--LTNHHCGFDAINLVVTWVFKYANNHNVPYI-----HF---LPVSLDGDFTMVMGYPGKGVNYWEATTNSSLNFDRVGSDI-Y---DPSIC-RNVMVDMRYVLVLINE--MKL--VHPKK |
3 | 5gmtA | 0.06 | 0.05 | 0.95 | 0.77 | CEthreader | | PGLFGGENGEGAYKCSGGSNPSSCFSLR-----LMWRKDGDGELYAYIPTNQESGFKDRDDVIAHSTYGQSLGRGKFRFMSISEEVHINTVGKTDGWVKICVQ---AEGHSQQCYTANHLRMRNTNSHHLRGMFFSSEKSYAAPNDCYSYFKNFQILTPSHAVVG |
4 | 3ei4B | 0.06 | 0.05 | 0.93 | 0.62 | EigenThreader | | PPC-----RTLHQHKLGRASWPSVQQGLQQSFLHTLDSYGGDDKPTFIKGIGAGGSITGLKFN------PLNTNQFYASSMVVTGDNVGNNLRMHKKKVTHVALNPCCDWFLATASVHPVNAAPDGARLLTTDQKQHLTPIKAAWHLIVVGRYPDPNFKSCTPYE |
5 | 4mfjA | 0.07 | 0.03 | 0.41 | 0.26 | HHpred | | --------------EWGPLLPKAYDESLHRARPFFDRHFPEHG--------ARVAWGSSW----------------MLDPQLEEYLTEDIIARFWTLTDSAPEPG------------------------------------------------------------ |
6 | 3d74A | 0.11 | 0.04 | 0.32 | 0.37 | MRFsearch | | ---DLVAEDKARCMSEHNVDEDIMLGLLPDQLQERAQS-----VMGKCLPTSGSDNCNKIY-------------------------------------------------------------------------------------------------------- |
7 | 1n69B | 0.17 | 0.05 | 0.33 | 0.40 | FFAS-3D | | FVQALVEHVKEECDRLGPGMADICKNYISQYSEIAIQMMMHMQPKEICAL---VGFC------------------------------------------------------------------------------------------------------------ |
8 | 1ay2A | 0.07 | 0.05 | 0.83 | 0.79 | SPARKS-K | | LMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQ------KSAVTEYYLNHGKWPENNTSASPPSDIKGKYVKEVEVKNGVVTATMLSSKGKKLSLWARRENGS---VKWFCGQPVTRTDDDT---VADAKDGKEIDTRDNFDAK---------------- |
9 | 4n8gA | 0.09 | 0.04 | 0.47 | 0.46 | CNFpred | | -----LIANGEWYDDLSEENRQAIEAAVQEASELNREDVEK--RVDERIQFLADQGMEVIEPTEDELAAF----REKGQPAYIEWLTDE---------------------------------------------------------------------------- |
10 | 3dtpB | 0.08 | 0.06 | 0.79 | 0.83 | DEthreader | | EDQSILENTKKVIQYLAVYGEKQLLQANPILEAFGNFLLEKSRRQA-----------ERTFHFLILEGFNYTFLSNK-----L-VNKALD-AS-FLGILDIAGFNYNEKLQQLF--YQLLMLTPNFVR-P------------L-EECDIKNKIQLEAKVKEMNER |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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