>PF06687 (211 residues) FPCALTIGSLICLVIVGLGCTRAHKAENLYFLRFIQALDEVNNTTGLNDFYSIGLWSYCT GNITDNGTYKTTYCSKPRGGFWFDPIDTWGLNGTNTNDFLPGKLKKSLNMYRNVSLWMAI IYLIAVIATVLEIMTGLMAVGGNRLVSCFAWLLAGVSLLFTTAMSITSTTIFATLAATVK TVLKPHGITGHMGRHIYAAAWLAVALSFLAS |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | FPCALTIGSLICLVIVGLGCTRAHKAENLYFLRFIQALDEVNNTTGLNDFYSIGLWSYCTGNITDNGTYKTTYCSKPRGGFWFDPIDTWGLNGTNTNDFLPGKLKKSLNMYRNVSLWMAIIYLIAVIATVLEIMTGLMAVGGNRLVSCFAWLLAGVSLLFTTAMSITSTTIFATLAATVKTVLKPHGITGHMGRHIYAAAWLAVALSFLAS | |||||||||||||||||||
1 | 6wxrB | 0.12 | 0.10 | 0.89 | 1.00 | DEthreader | LRVVTSLFIGAVILAVNFSS--------EWSVGHVNA-NTTYKAFS-DVGLQIGLGGVNITLTGTPVTINYNEAFAWRLGRSYA-EYAAVLY-AEKTPRSP--CG-LYNQYRLAGHYASAMLWVAFLCWLLANVMLSMP----V--LVYGGHMLLATGLFQLLALFFFSMT-TSLISPC--PLRLGAVLHTHHGPAFWITLATGLLCILLG | |||||||||||||
2 | 6wxrB | 0.10 | 0.09 | 0.90 | 1.17 | DEthreader | LRVVTSLFIGAVILAVNFSS--------EWSVGHVNANTT-YKAFS-VVGLQIGLGGVNITLTGTPVQTINYNEAFAWRLGRSY-AEEYAKALEYEK-TPRSPCG-LYNQYRLAGHYASAMLWVAFLCWLLANVMLSMP------VLVYGGHMLLATGLFQLLALFFFSMT-TSLISPC--PLRLGAVLHTHHGPAFWITLATGLLCILLG | |||||||||||||
3 | 6akfA | 0.13 | 0.10 | 0.78 | 1.38 | SPARKS-K | TGTSLAVLGWLCTIVCCALPM---------WRVSAFIGSSIIT----AQITWEGLWMNCVVQS-----TGQMQCKMY-----------------DSLLALPQ-----------DLQAARALIVVSILLAAFGLLVALVGAQATNAVQDAKAKITIVAGVLFLLAALLTLVAVSWSANTIIRDFYPEAQKREMG-AGLYVGWAAAALQLLGG | |||||||||||||
4 | 6akfA | 0.17 | 0.13 | 0.76 | 1.85 | HHsearch | TGTSLAVLGWLCTIVCCA---L-P-----MWRVSAFIGS----SIITAQITWEGLWMNCVVQST-----GQMQCKMYDSL-----------------LALPQDLQ-----------AARALIVVSILLAAFGLLVALVGAQAKAKITIVAGVLFLLAALLTLVAVSWSANTII---RDFYNPLVPEAQKREMGAGLY-VGWAAAALQLLGG | |||||||||||||
5 | 5b2gA2 | 0.13 | 0.09 | 0.75 | 1.00 | DEthreader | MGIALAVLGWLAVMLCCALP---------MWRVTAFIGSNIV----TSQTIWEGLWMNCVVQS-----TGQMQCKVYDLLAL-----------------------------PQDLQAARALVIISIIVAALGVLLSVV--GAKAKTMIVAGVVFLLAGLMVIVPVSWTAHNIIQDFYN--PLVAS-GQKREMG-ASLYVGWAASGLLLLGG | |||||||||||||
6 | 5b2gA2 | 0.11 | 0.08 | 0.75 | 1.00 | DEthreader | MGIALAVLGWLAVMLCCALP--------MWRVTAFIG-SNIV----TSQTIWEGLWMNCVVQST-----GQMQCKVYD--LLAL---------------------------PQDLQAARALVIISIIVAALGVLLSVVG-SAKAKTMIVAGVVFLLAGLMVIVPVSWTAHNIIQDFYN--PLVA--SGQKREMGASLYVGWAASGLLLLGG | |||||||||||||
7 | 5b2gA2 | 0.12 | 0.09 | 0.76 | 1.00 | DEthreader | MGIALAVLGWLAVMLCCALP--------MWRVTAFIG-SNIVT----SQTIWEGLWMNCVVQST-----GQMQCKVYD-SLL-A------------------------L--PQDLQAARALVIISIIVAALGVLLSVVG-SAKAKTMIVAGVVFLLAGLMVIVPVSWTAHNIIQDFYN--PLVA-SGQKREMG-ASLYVGWAASGLLLLGG | |||||||||||||
8 | 3x29A | 0.13 | 0.10 | 0.75 | 1.22 | SPARKS-K | LQLLGYFLALGGWVGIIASTALPQ------WKQSSYAGDAIITA----VGLYEGLWMSCAS--------GQVQCKLYDGH----------------------------------IQSARALMVVAVLLGFVAMVLSVVGMKNPTAKSRVAISGGALFLLAGLCTLTAVSWYATLVTQEFFNPSTPVNARYEFG-PALFVGWASAGLAMLGG | |||||||||||||
9 | 6ov2A | 0.14 | 0.10 | 0.76 | 1.85 | HHsearch | LGMTLAVLGWLGTLVSCA---L-P-----LWKVTAFIGN----SIVVAQVVWEGLWMSCVVQST-----GQMQCKVYDSL-----------------LALPQDLQA-----------ARALCVIALLLALLGLLVAITGAQCKARIVLTAGVILLLAGILVLIPVCWTAHAI---IQDFYNPLVAEALKRELGASLY-LGWAAAALLMLGG | |||||||||||||
10 | 5b2gA | 0.14 | 0.10 | 0.76 | 1.00 | DEthreader | MGIALAVLGWLAVMLCCALP---------MWRVTAF-IGSNIV--T-SQTIWEGLWMNCVVQ-S----TGQMQCKVYDLLALP----------------------------QD-LQAARALVIISIIVAALGVLLSVV--GESAK-AKTMIVAGVVFLLAGLMVIVPVSWTAHNIIQDFYNPLVASGQKREMG-ASLYVGWAASGLLLLGG | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |